RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ANAPC15P60006 121 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 HAND2P61296 217 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 TNK2Q07912 1038 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 SCRN1Q12765 414 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 TRDNQ13061 729 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 ELOAQ14241 798 aaKnown RBP5.81□□□□□ -1.48
FXN-205ENST00000498653 KRT32Q14532 448 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 ODR4Q5SWX8 454 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 RCSD1Q6JBY9 416 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 TMEM214Q6NUQ4 689 aaKnown RBP5.81□□□□□ -1.48
FXN-205ENST00000498653 BTNL9Q6UXG8 535 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 ANKMY2Q8IV38 441 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 SLC41A1Q8IVJ1 513 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 KCNB2Q92953 911 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 LURAP1Q96LR2 239 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 TBC1D32Q96NH3 1257 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 PNMA5Q96PV4 448 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 ZSCAN10Q96SZ4 725 aaPredicted RBP5.81□□□□□ -1.48
FXN-205ENST00000498653 OSMRQ99650 979 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 RNF41Q9H4P4 317 aaPredicted RBP5.81□□□□□ -1.48
FXN-205ENST00000498653 ZNF287Q9HBT7 754 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 FBRSL1Q9HCM7 1045 aaKnown RBP5.81□□□□□ -1.48
FXN-205ENST00000498653 ASCL3Q9NQ33 180 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 GEMIN8Q9NWZ8 242 aaKnown RBP5.81□□□□□ -1.48
FXN-205ENST00000498653 ANAPC4Q9UJX5 808 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 PCDHGB2Q9Y5G2 931 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 PCDHGA1Q9Y5H4 931 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 SNX14Q9Y5W7 946 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 BIRC6Q9NR09 4857 aa5.81□□□□□ -1.48
FXN-205ENST00000498653 TMEM200CA6NKL6 621 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 E7EWF7 191 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 TRDMT1O14717 391 aaKnown RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 NRP1O14786 923 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 N4BP3O15049 544 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 MTSS1O43312 755 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 HNRNPRO43390 633 aaKnown RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 PCP11498 1178 aaKnown RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 INSRRP14616 1297 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 GNLYP22749 145 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 PSMA5P28066 241 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 SMTNP53814 917 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 BNC1Q01954 994 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 CENPCQ03188 943 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ZNF33AQ06730 810 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 GRSF1Q12849 480 aaKnown RBP eCLIP5.8□□□□□ -1.48
FXN-205ENST00000498653 DPYDQ12882 1025 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 CLCA4Q14CN2 919 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 PLCB4Q15147 1175 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 CRTC2Q53ET0 693 aaPredicted RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 NOMO2Q5JPE7 1267 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 RRP12Q5JTH9 1297 aaKnown RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 ARHGEF16Q5VV41 709 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 NAIF1Q69YI7 327 aaPredicted RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 MFSD6Q6ZSS7 791 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 CYFIP1Q7L576 1253 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 LYSMD3Q7Z3D4 306 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 RALYLQ86SE5 291 aaKnown RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 ATCAYQ86WG3 371 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 TBC1D10CQ8IV04 446 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 SLC34A3Q8N130 599 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 STK11IPQ8N1F8 1099 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 DEFB119Q8N690 84 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 RNF217Q8TC41 542 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 RSPH1Q8WYR4 309 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 LPPQ93052 612 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ACDQ96AP0 544 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 VCPIP1Q96JH7 1222 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 SPACA7Q96KW9 195 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 LRRC3BQ96PB8 259 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 PPP1R16BQ96T49 567 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 PDCD2LQ9BRP1 358 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 KRT23Q9C075 422 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ZDHHC5Q9C0B5 715 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 CNNM2Q9H8M5 875 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.8□□□□□ -1.48
FXN-205ENST00000498653 TOMM22Q9NS69 142 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ZNF358Q9NW07 568 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 SERTAD1Q9UHV2 236 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ANAPC2Q9UJX6 822 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 NOVA2Q9UNW9 492 aaKnown RBP5.8□□□□□ -1.48
FXN-205ENST00000498653 INPP5FQ9Y2H2 1132 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 KNL1Q8NG31 2342 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ESPL1Q14674 2120 aa5.8□□□□□ -1.48
FXN-205ENST00000498653 ARHGAP10A1A4S6 786 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 FIGNL2A6NMB9 653 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 TMEM229AB2RXF0 380 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 LCE2BO14633 110 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 ORC4O43929 436 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 RANBP6O60518 1105 aaKnown RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 MOSPD3O75425 235 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 RFPL3O75679 317 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 TCF7P36402 384 aaPredicted RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 NT5C2P49902 561 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 AFF1P51825 1210 aaKnown RBP5.79□□□□□ -1.48
FXN-205ENST00000498653 INHBCP55103 352 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 ERVPABLB-1P60509 514 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 PDE4CQ08493 712 aa5.79□□□□□ -1.48
FXN-205ENST00000498653 KIZQ2M2Z5 673 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms