RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PEX10O60683 326 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 GLRA2P23416 452 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 GCAP28676 217 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 SETDB1Q15047 1291 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 PARP6Q2NL67 630 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 SEZ6Q53EL9 994 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 C11orf70Q9BRQ4 267 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 APOBEC3GQ9HC16 384 aaKnown RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 KIAA1586Q9HCI6 787 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 AVENQ9NQS1 362 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 ZNF302Q9NR11 478 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 RBAKQ9NYW8 714 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 ZMYND8Q9ULU4 1186 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 CORO1CQ9ULV4 474 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 GSTTP1A0A1W2PQM5 241 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 PEX11AO75192 247 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 HARSP12081 509 aaKnown RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 GM2AP17900 193 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 MAGEA4P43358 317 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 CLDN10P78369 228 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 KLF1Q13351 362 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 ZNF365Q70YC5 407 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 DEPTORQ8TB45 409 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 NAF1Q96HR8 494 aaKnown RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 C12orf42Q96LP6 360 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 TARS2Q9BW92 718 aaKnown RBP17.3■□□□□ 0.36
COL6A1-206ENST00000498614 KIF9Q9HAQ2 790 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 RNPEPL1Q9HAU8 725 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 GRID1Q9ULK0 1009 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 PCDHB4Q9Y5E5 795 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 LCTP09848 1927 aa17.3■□□□□ 0.36
COL6A1-206ENST00000498614 IRF6O14896 467 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 MAGEB2O15479 319 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 OATP04181 439 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 CYP1A1P04798 512 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-206ENST00000498614 EDN1P05305 212 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 YARSP54577 528 aaKnown RBP17.29■□□□□ 0.36
COL6A1-206ENST00000498614 CENPCQ03188 943 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 MOGSQ13724 837 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 TMEM270Q6UE05 265 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 MON1BQ7L1V2 547 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 TRABD2AQ86V40 505 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 ZNF677Q86XU0 584 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 FAM81BQ96LP2 452 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 RBM15Q96T37 977 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL6A1-206ENST00000498614 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 USH1CQ9Y6N9 552 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 UMODL1Q5DID0 1318 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 K7ERI5 159 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 LIN7AO14910 233 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-206ENST00000498614 T-ENOLP0DO92 83 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
COL6A1-206ENST00000498614 GJC1P36383 396 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 CNTN2Q02246 1040 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 ENPEPQ07075 957 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 CUL2Q13617 745 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 SCARA3Q6AZY7 606 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 TRIM68Q6AZZ1 485 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 ANKS1BQ7Z6G8 1248 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 RELL1Q8IUW5 271 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 AGGF1Q8N302 714 aaeCLIP17.29■□□□□ 0.36
COL6A1-206ENST00000498614 FAM13CQ8NE31 585 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 LRRC37BQ96QE4 947 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 PORCNQ9H237 461 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 STYXL1Q9Y6J8 313 aa17.29■□□□□ 0.36
COL6A1-206ENST00000498614 EXOC1LA0A1B0GW35 172 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 SPDYE16A6NNV3 312 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 ATP5HO75947 161 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 CELF2O95319 508 aaKnown RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 MYBL1P10243 752 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 CALB2P22676 271 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 GNA15P30679 374 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 PEX19P40855 299 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 BPIFB4P59827 614 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 SATB1Q01826 763 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 TRIM11Q96F44 468 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 A6NHS1 94 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 C19orf81C9J6K1 198 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 STAM2O75886 525 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 LUC7L3O95232 432 aaKnown RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 IRX1P78414 480 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 STXBP2Q15833 593 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 CCNG2Q16589 344 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 P3H1Q32P28 736 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 HP1BP3Q5SSJ5 553 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 NOL9Q5SY16 702 aaKnown RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 ZNF449Q6P9G9 518 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 LONP2Q86WA8 852 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 ARMC2Q8NEN0 867 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 OR5B17Q8NGF7 314 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 SLC7A6OSQ96CW6 309 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-206ENST00000498614 TBC1D10AQ9BXI6 508 aa17.28■□□□□ 0.36
COL6A1-206ENST00000498614 DHX33Q9H6R0 707 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms