RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 ELOVL4Q9GZR5 314 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 DNAI2Q9GZS0 605 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 SNX25Q9H3E2 840 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 NHEJ1Q9H9Q4 299 aaPredicted RBP12.43□□□□□ -0.42
SCG5-209ENST00000498607 NPDC1Q9NQX5 325 aaPredicted RBP12.43□□□□□ -0.42
SCG5-209ENST00000498607 HMGXB4Q9UGU5 601 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 INSL6Q9Y581 213 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 MRPL42Q9Y6G3 142 aaKnown RBP12.43□□□□□ -0.42
SCG5-209ENST00000498607 CEP290O15078 2479 aa12.43□□□□□ -0.42
SCG5-209ENST00000498607 SF3B1O75533 1304 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCG5-209ENST00000498607 GABRDO14764 452 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 SYN3O14994 580 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 TADA2AO75478 443 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 GNA15P30679 374 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 GNL1P36915 607 aaPredicted RBP12.42□□□□□ -0.42
SCG5-209ENST00000498607 LHX1P48742 406 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
SCG5-209ENST00000498607 ASTE1Q2TB18 679 aaPredicted RBP12.42□□□□□ -0.42
SCG5-209ENST00000498607 ZNF394Q53GI3 561 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 SPOUT1Q5T280 376 aaKnown RBP12.42□□□□□ -0.42
SCG5-209ENST00000498607 FUT10Q6P4F1 479 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 KCNT2Q6UVM3 1135 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 RAD9BQ6WBX8 426 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 OSTM1Q86WC4 334 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 ZNF677Q86XU0 584 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 PARP9Q8IXQ6 854 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 OR6B3Q8NGW1 331 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 OLIG1Q8TAK6 271 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 SLC20A1Q8WUM9 679 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 TMEM176AQ96HP8 235 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
SCG5-209ENST00000498607 CCDC42Q96M95 316 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 TWNKQ96RR1 684 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 RAD9AQ99638 391 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 KIAA1257Q9ULG3 409 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 NME7Q9Y5B8 376 aa12.42□□□□□ -0.42
SCG5-209ENST00000498607 A8MXQ7 604 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 THAP12O43422 761 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 AKR1B10O60218 316 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 NDUFA10O95299 355 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 CHRNB2P17787 502 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 BRD2P25440 801 aaKnown RBP12.41□□□□□ -0.42
SCG5-209ENST00000498607 PCSK1P29120 753 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 PBX3P40426 434 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 KIF11P52732 1056 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 CDR2Q01850 454 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 BMS1Q14692 1282 aaKnown RBP12.41□□□□□ -0.42
SCG5-209ENST00000498607 MTF1Q14872 753 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 C9orf50Q5SZB4 431 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 NLRC5Q86WI3 1866 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 CRYBG2Q8N1P7 616 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 BCL7CQ8WUZ0 217 aaPredicted RBP12.41□□□□□ -0.42
SCG5-209ENST00000498607 DDX1Q92499 740 aaKnown RBP12.41□□□□□ -0.42
SCG5-209ENST00000498607 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 TNIP3Q96KP6 325 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 AGPAT1Q99943 283 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 GDF15Q99988 308 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 ACP6Q9NPH0 428 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 SPG21Q9NZD8 308 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 STXBP5LQ9Y2K9 1186 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 ZKSCAN5Q9Y2L8 839 aa12.41□□□□□ -0.42
SCG5-209ENST00000498607 EPN1Q9Y6I3 576 aaPredicted RBP12.41□□□□□ -0.42
SCG5-209ENST00000498607 GBF1Q92538 1859 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 A0A087X0T9 212 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 EIF3CLB5ME19 914 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 NT5C1B-RDH14C9J2C7 533 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 DDX3XO00571 662 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCG5-209ENST00000498607 MAP3K7O43318 606 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 MED7O43513 233 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TLL1O43897 1013 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 IPO7O95373 1038 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 LCA5LO95447 670 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 CALCAP01258 141 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 MMEP08473 750 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 FAM228BP0C875 321 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 VDRP11473 427 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 CD19P15391 556 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TNFAIP3P21580 790 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 FGFR3P22607 806 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TKTP29401 623 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 PPM1AP35813 382 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 FMO1Q01740 532 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 ORC1Q13415 861 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 SHHQ15465 462 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 STILQ15468 1287 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 TRIM72Q6ZMU5 477 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms