RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, human

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-213	ENST00000498524	WDR5	P61964	334 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PPP2R2A	P63151	447 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MRPS25	P82663	173 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SKOR1	P84550	965 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAAP100	Q0VG06	881 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CBX2	Q14781	532 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SURF1	Q15526	300 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	USP41	Q3LFD5	358 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EPC2	Q52LR7	807 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	USP39	Q53GS9	565 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	XKR3	Q5GH77	459 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	C9orf50	Q5SZB4	431 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF449	Q6P9G9	518 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PDZD4	Q76G19	769 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	HS2ST1	Q7LGA3	356 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	BMP8A	Q7Z5Y6	402 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SH3RF1	Q7Z6J0	888 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	BRSK2	Q8IWQ3	736 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SH2D3C	Q8N5H7	860 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM133A	Q8N9E0	248 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KLHDC9	Q8NEP7	349 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	AEN	Q8WTP8	325 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GDPD5	Q8WTR4	605 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DEPDC1B	Q8WUY9	529 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TMEM175	Q9BSA9	504 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DDX4	Q9NQI0	724 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	INTS9	Q9NV88	658 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CPSF2	Q9P2I0	782 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PLAGL2	Q9UPG8	496 aa		4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PIN4	Q9Y237	131 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PTPRZ1	P23471	2315 aa	Predicted RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ATXN2	Q99700	1313 aa	Known RBP	4.16	□□□□□ -1.74
ANKRD28-213	ENST00000498524	AFDN	P55196	1824 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SMIM35	A0A1B0GVV1	85 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PVALEF	A0A1B0GWK0	134 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ESYT3	A0FGR9	886 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TRIM64	A6NGJ6	449 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TRIM64B	A6NI03	449 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524		H0Y3Z8	333 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SMIM10L2A	P0DMW4	78 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SMIM10L2B	P0DMW5	78 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	KRT10	P13645	584 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CPB1	P15086	417 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RPL17	P18621	184 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RASA1	P20936	1047 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ALDH3A1	P30838	453 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	OR1G1	P47890	313 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MYL7	Q01449	175 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DHX9	Q08211	1270 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF211	Q13398	564 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CELF3	Q5SZQ8	465 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	POTEH	Q6S545	545 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DSTYK	Q6XUX3	929 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	UNC13D	Q70J99	1090 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CCDC25	Q86WR0	208 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RAVER1	Q8IY67	606 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GBP7	Q8N8V2	638 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RASGRP4	Q8TDF6	673 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	POF1B	Q8WVV4	589 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FMO2	Q99518	471 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RPF1	Q9H9Y2	349 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	POLM	Q9NP87	494 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SEL1L	Q9UBV2	794 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PCDHA10	Q9Y5I2	948 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CDY2A	Q9Y6F7	541 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.15	□□□□□ -1.74	4e-7	■■■■■ 63.2
ANKRD28-213	ENST00000498524	GALR2	O43603	387 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TSPAN6	O43657	245 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LZTS3	O60299	673 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	SUN1	O94901	812 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MARK3	P27448	753 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	NNMT	P40261	264 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	STAT1	P42224	750 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	EFNA5	P52803	228 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RABGGTB	P53611	331 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CRYBB1	P53674	252 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	PURA	Q00577	322 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GFPT1	Q06210	699 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ORC2	Q13416	577 aa	Predicted RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CCDC6	Q16204	474 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	MEA1	Q16626	185 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	XKR9	Q5GH70	373 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LHX8	Q68G74	356 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	CEP128	Q6ZU80	1094 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ADAT2	Q7Z6V5	191 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	C14orf80	Q86SX3	495 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	FAM178B	Q8IXR5	827 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	GUF1	Q8N442	669 aa	Known RBP	4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	RUNDC3B	Q96NL0	473 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	ADAM2	Q99965	735 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	TRIM9	Q9C026	710 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	LACRT	Q9GZZ8	138 aa		4.15	□□□□□ -1.74
ANKRD28-213	ENST00000498524	DPH5	Q9H2P9	285 aa		4.15	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms