RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZZEF1O43149 2961 aa17.4■□□□□ 0.38
MUC1-220ENST00000498431 ANO9A1A5B4 782 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 VWA3AA6NCI4 1184 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 TM4SF5O14894 197 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 RPP40O75818 363 aaKnown RBP17.39■□□□□ 0.37
MUC1-220ENST00000498431 NMT1P30419 496 aaKnown RBP17.39■□□□□ 0.37
MUC1-220ENST00000498431 RAP1GAPP47736 663 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 TMEM196Q5HYL7 178 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 N4BP2L1Q5TBK1 243 aaPredicted RBP17.39■□□□□ 0.37
MUC1-220ENST00000498431 IL31Q6EBC2 164 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 TMEM150AQ86TG1 271 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 CMTM8Q8IZV2 173 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 STKLD1Q8NE28 680 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 KCNN1Q92952 543 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.37
MUC1-220ENST00000498431 FAM83CQ9BQN1 747 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 KCND2Q9NZV8 630 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.39■□□□□ 0.37
MUC1-220ENST00000498431 OBSL1O75147 1896 aa17.39■□□□□ 0.37
MUC1-220ENST00000498431 TISP43B9A030 160 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 H0YCG3 227 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 K7ENM7 598 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 FOXD2O60548 495 aaPredicted RBP17.38■□□□□ 0.37
MUC1-220ENST00000498431 EPN2O95208 641 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 ZNF806P0C7X5 589 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 PMLP29590 882 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 CDC25CP30307 473 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 TUFMP49411 452 aaKnown RBP17.38■□□□□ 0.37
MUC1-220ENST00000498431 LIMK1P53667 647 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 RUNX3Q13761 415 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 TMEM132DQ14C87 1099 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 VEPH1Q14D04 833 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 KYAT1Q16773 422 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 NAIF1Q69YI7 327 aaPredicted RBP17.38■□□□□ 0.37
MUC1-220ENST00000498431 GPBP1Q86WP2 473 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 CDK5RAP3Q96JB5 506 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 TSPAN18Q96SJ8 248 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 KIF2CQ99661 725 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 FBRSL1Q9HCM7 1045 aaKnown RBP17.38■□□□□ 0.37
MUC1-220ENST00000498431 SH2B1Q9NRF2 756 aaPredicted RBP17.38■□□□□ 0.37
MUC1-220ENST00000498431 THG1LQ9NWX6 298 aaKnown RBP17.38■□□□□ 0.37
MUC1-220ENST00000498431 TCHHQ07283 1943 aa17.38■□□□□ 0.37
MUC1-220ENST00000498431 ZNF638Q14966 1978 aaKnown RBP17.37■□□□□ 0.37
MUC1-220ENST00000498431 ANKRD63C9JTQ0 380 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 CYB561D2O14569 222 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 EGFP01133 1207 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 HAPLN1P10915 354 aaPredicted RBP17.37■□□□□ 0.37
MUC1-220ENST00000498431 ARSAP15289 507 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 ACOT2P49753 483 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 DHX8Q14562 1220 aaKnown RBP17.37■□□□□ 0.37
MUC1-220ENST00000498431 STPG1Q5TH74 334 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 WSCD1Q658N2 575 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 MYCT1Q8N699 235 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 MAB21L3Q8N8X9 362 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 C12orf50Q8NA57 414 aaPredicted RBP17.37■□□□□ 0.37
MUC1-220ENST00000498431 DDX1Q92499 740 aaKnown RBP17.37■□□□□ 0.37
MUC1-220ENST00000498431 USP13Q92995 863 aaPredicted RBP17.37■□□□□ 0.37
MUC1-220ENST00000498431 LOXL4Q96JB6 756 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 GCNAQ96QF7 691 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 FIZ1Q96SL8 496 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 ODF2LQ9ULJ1 636 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 ASPMQ8IZT6 3477 aa17.37■□□□□ 0.37
MUC1-220ENST00000498431 TRDMT1O14717 391 aaKnown RBP17.36■□□□□ 0.37
MUC1-220ENST00000498431 RNF40O75150 1001 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 F11P03951 625 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 HMGA1P17096 107 aaKnown RBP17.36■□□□□ 0.37
MUC1-220ENST00000498431 GPR15P49685 360 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 ZNF131P52739 623 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 NLRP12P59046 1061 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 TAF12Q16514 161 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 PLA2G2CQ5R387 149 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 CD302Q8IX05 232 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 KCTD17Q8N5Z5 321 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 PYM1Q9BRP8 204 aaKnown RBP17.36■□□□□ 0.37
MUC1-220ENST00000498431 IKZF4Q9H2S9 585 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 BLOC1S4Q9NUP1 217 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 TMLHEQ9NVH6 421 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 ABI2Q9NYB9 513 aaPredicted RBP17.36■□□□□ 0.37
MUC1-220ENST00000498431 ANGPTL2Q9UKU9 493 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 SPEGQ15772 3267 aa17.36■□□□□ 0.37
MUC1-220ENST00000498431 CCDC163A0A0D9SF12 145 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 FAM13AO94988 1023 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 GRSF1Q12849 480 aaKnown RBP eCLIP17.35■□□□□ 0.37
MUC1-220ENST00000498431 SDHAF4Q5VUM1 108 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 TXNDC8Q6A555 127 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 TCEAL6Q6IPX3 200 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 SPPL2BQ8TCT7 592 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 TCEAL3Q969E4 200 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 HHIPQ96QV1 700 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 PARVGQ9HBI0 331 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 DPP3Q9NY33 737 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 DSEQ9UL01 958 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 SLC8A2Q9UPR5 921 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 DERAQ9Y315 318 aa17.35■□□□□ 0.37
MUC1-220ENST00000498431 TRAK2O60296 914 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms