RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 WARSP23381 471 aaKnown RBP8.96□□□□□ -0.98
SF3A1-210ENST00000498259 GTF2F1P35269 517 aaKnown RBP eCLIP8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ACADSBP45954 432 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 CDH8P55286 799 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 NOMO3P69849 1222 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ACAP1Q15027 740 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 UPP1Q16831 310 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ODF2Q5BJF6 829 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 NOMO2Q5JPE7 1267 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 MEI1Q5TIA1 1274 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ARHGAP17Q68EM7 881 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 DCUN1D2Q6PH85 259 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 LCLAT1Q6UWP7 414 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 AGMOQ6ZNB7 445 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 SLFN11Q7Z7L1 901 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ADGRF2Q8IZF7 708 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 SLC4A11Q8NBS3 891 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ZNF564Q8TBZ8 553 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-210ENST00000498259 CPA5Q8WXQ8 436 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 GOLGA1Q92805 767 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 C18orf8Q96DM3 657 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 ZFP42Q96MM3 310 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 PCDHB18PQ96TA0 734 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 NUP85Q9BW27 656 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 PACSIN1Q9BY11 444 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 OXCT2Q9BYC2 517 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-210ENST00000498259 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 IP6K2Q9UHH9 426 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.96□□□□□ -0.98
SF3A1-210ENST00000498259 STXBP5LQ9Y2K9 1186 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 CAPN6Q9Y6Q1 641 aa8.96□□□□□ -0.98
SF3A1-210ENST00000498259 CITO14578 2027 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 M0QYV0 167 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 DYNC1I1O14576 645 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ENPP3O14638 875 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 SPOPO43791 374 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 POMCP01189 267 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 CXCL10P02778 98 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ALDH2P05091 517 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 CLTBP09497 229 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 BRD2P25440 801 aaKnown RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 SCNN1GP51170 649 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 CLCNKBP51801 687 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ATN1P54259 1190 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 BCAT1P54687 386 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 TLE2Q04725 743 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ITIH3Q06033 890 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ELAVL2Q12926 359 aaKnown RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 PIGHQ14442 188 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ZNF268Q14587 947 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 SOWAHAQ2M3V2 549 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 DNAJC24Q6P3W2 148 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 MON1BQ7L1V2 547 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ZNF598Q86UK7 904 aaKnown RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 C3orf20Q8ND61 904 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 C1orf131Q8NDD1 294 aaKnown RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 OSBPL9Q96SU4 736 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 COLEC11Q9BWP8 271 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ACP6Q9NPH0 428 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 TMEM51Q9NW97 253 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 TAS2R14Q9NYV8 317 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 STK39Q9UEW8 545 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 PRKAG2Q9UGJ0 569 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 ANAPC7Q9UJX3 599 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 CDH9Q9ULB4 789 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 TFR2Q9UP52 801 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 RALGAPA2Q2PPJ7 1873 aa8.95□□□□□ -0.98
SF3A1-210ENST00000498259 TRIP12Q14669 1992 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-210ENST00000498259 UQCRHLA0A096LP55 91 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 GOLGA6L10A0A0M3HER8 536 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 A0A0U1RQJ8 604 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 ABHD14A-ACY1A0A1B0GW23 586 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 TMEM189-UBE2V1I3L0A0 370 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 O00370 1275 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 ENC1O14682 589 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 SART1O43290 800 aaKnown RBP8.94□□□□□ -0.98
SF3A1-210ENST00000498259 MGEA5O60502 916 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 BUB1BO60566 1050 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-210ENST00000498259 MICAL2O94851 1124 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 ABL1P00519 1130 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 ATP1A1P05023 1023 aaKnown RBP8.94□□□□□ -0.98
SF3A1-210ENST00000498259 UQCRHP07919 91 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 KRT3P12035 628 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 TYMPP19971 482 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 RRM1P23921 792 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 MAN1A1P33908 653 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 RAP1GAPP47736 663 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 GUCY2FP51841 1108 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 LBX1P52954 281 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 GSCP56915 257 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-210ENST00000498259 TSPY1Q01534 308 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 FAAP100Q0VG06 881 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 BST2Q10589 180 aaKnown RBP8.94□□□□□ -0.98
SF3A1-210ENST00000498259 MESDQ14696 234 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 PLEKHA7Q6IQ23 1121 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 CNKSR3Q6P9H4 555 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 TRAF7Q6Q0C0 670 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 MMS22LQ6ZRQ5 1243 aa8.94□□□□□ -0.98
SF3A1-210ENST00000498259 LIMS2Q7Z4I7 341 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms