RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ARVCFO00192 962 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 O00370 1275 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 HCRTO43612 131 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 CAND2O75155 1236 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 RAB27AP51159 221 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 SCNN1GP51170 649 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 TUBB4BP68371 445 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 MTFR1Q15390 333 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 SV2CQ496J9 727 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 PTPN20Q4JDL3 420 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 PLEKHA7Q6IQ23 1121 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 ACOT1Q86TX2 421 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 ERICH1Q86X53 443 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 C12orf29Q8N999 325 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 OR6B3Q8NGW1 331 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 DEFB118Q96PH6 123 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 PNKPQ96T60 521 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 LHX5Q9H2C1 402 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 PTPN22Q9Y2R2 807 aa18.88■□□□□ 0.61
CHRNA4-206ENST00000498043 MIF4GDA9UHW6 222 aaKnown RBP18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 PGRMC1O00264 195 aaKnown RBP18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 H2AFXP16104 143 aaPredicted RBP18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 LRPAP1P30533 357 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 ITIH3Q06033 890 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 ZNF211Q13398 564 aaPredicted RBP18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 MBTPS1Q14703 1052 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 TRAF7Q6Q0C0 670 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 PDCL2Q8N4E4 241 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 SLC38A7Q9NVC3 462 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 PARVAQ9NVD7 372 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 TJP2Q9UDY2 1190 aa18.87■□□□□ 0.61
CHRNA4-206ENST00000498043 DNM1LO00429 736 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 THP07101 528 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 DNAJC24Q6P3W2 148 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 UBL4BQ8N7F7 174 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 USP38Q8NB14 1042 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 MSANTD4Q8NCY6 345 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 ACTRT1Q8TDG2 376 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 KBTBD7Q8WVZ9 684 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 CD101Q93033 1021 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 DPEP3Q9H4B8 488 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 FAM49BQ9NUQ9 324 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 MIOSQ9NXC5 875 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 GDAP2Q9NXN4 497 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 TSPAN16Q9UKR8 245 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 GIT1Q9Y2X7 761 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 A0A0U1RQF3 1178 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 A8MXQ7 604 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 MYO1FO00160 1098 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 LILRA4P59901 499 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 DAB2IPQ5VWQ8 1189 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 MRPL10Q7Z7H8 261 aaKnown RBP18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 UBA3Q8TBC4 463 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 CPXM1Q96SM3 734 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 CARD9Q9H257 536 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 TSPYL2Q9H2G4 693 aaPredicted RBP18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 RSAD1Q9HA92 442 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 PAK6Q9NQU5 681 aaPredicted RBP18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 L1RE1Q9UN81 338 aa18.86■□□□□ 0.61
CHRNA4-206ENST00000498043 FGFR1P11362 822 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 IGFBP6P24592 240 aaPredicted RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 CTNNA1P35221 906 aaKnown RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 RPL7AP62424 266 aaKnown RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 CNGA2Q16280 664 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 GOLGA7BQ2TAP0 167 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 MMGT1Q8N4V1 131 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 APPL2Q8NEU8 664 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 RNPC3Q96LT9 517 aaKnown RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 MCEEQ96PE7 176 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 TRAIPQ9BWF2 469 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 WNT8AQ9H1J5 351 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 SYNCQ9H7C4 482 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 TDRD15B5MCY1 1934 aaKnown RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 CASTOR2A6NHX0 329 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 ZNF623O75123 536 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 CLCN6P51797 869 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 MRPS25P82663 173 aaKnown RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 PDCLQ13371 301 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 PPP1R26Q5T8A7 1209 aaPredicted RBP18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 AADACL2Q6P093 401 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 ADGRF2Q8IZF7 708 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 RASGEF1CQ8N431 466 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 LPIN3Q9BQK8 851 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 INPP5FQ9Y2H2 1132 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 SQORQ9Y6N5 450 aa18.85■□□□□ 0.61
CHRNA4-206ENST00000498043 TCRBV5S1A1TA0A578 114 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 GOLGA8SH3BPF8 625 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 HUS1O60921 280 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 POMCP01189 267 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 PDGFRBP09619 1106 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 CLCNKBP51801 687 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 LCLAT1Q6UWP7 414 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 UNC93AQ86WB7 457 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 FEZF2Q8TBJ5 459 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 AP1M1Q9BXS5 423 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 RNF208Q9H0X6 261 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 SNX25Q9H3E2 840 aa18.84■□□□□ 0.61
CHRNA4-206ENST00000498043 ARGLU1Q9NWB6 273 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms