RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 EURLQ9NYK6 297 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PTTG2Q9NZH5 202 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 GMEB1Q9Y692 573 aa13.73□□□□□ -0.21
GAPVD1-220ENST00000497580 PMLP29590 882 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF76P36508 570 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 GAD2Q05329 585 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 HIC1Q14526 733 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 MFSD4BQ5TF39 518 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 NET1Q7Z628 596 aaPredicted RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ZBTB8BQ8NAP8 495 aaPredicted RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PAFAH2Q99487 392 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PRPF18Q99633 342 aaKnown RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ESYT2A0FGR8 921 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PRR5-ARHGAP8B1AHC4 643 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 CDK4P11802 303 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ARHGAP8P85298 464 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PPIDQ08752 370 aaKnown RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ODR4Q5SWX8 454 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 GRAMD4Q6IC98 578 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ANKRD23Q86SG2 305 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PDSS2Q86YH6 399 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ADGRF4Q8IZF3 695 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 EPS8L1Q8TE68 723 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PYROXD1Q8WU10 500 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 USP29Q9HBJ7 922 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 I3L4J1 428 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 STAMBPO95630 424 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PCSK6P29122 969 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 PDE1BQ01064 536 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 BFSP1Q12934 665 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 TBC1D9BQ66K14 1250 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 CPA5Q8WXQ8 436 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 KCNK13Q9HB14 408 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 ADAMTS6Q9UKP5 1117 aa13.72□□□□□ -0.21
GAPVD1-220ENST00000497580 KAT6AQ92794 2004 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 SGK1O00141 431 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 TM7SF2O76062 418 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 MLH1P40692 756 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 SERPINB8P50452 374 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 FOLH1Q04609 750 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 RALGPS1Q5JS13 557 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 PALM2Q8IXS6 379 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 AK5Q9Y6K8 562 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 RAG1P15918 1043 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 PSMD7P51665 324 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 GEMIN4P57678 1058 aaKnown RBP13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 DYNLT1P63172 113 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 PEX6Q13608 980 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 CYTH1Q15438 398 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 USH1GQ495M9 461 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 C3orf62Q6ZUJ4 267 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 CENPUQ71F23 418 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 ZNF398Q8TD17 642 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 FAM84AQ96KN4 292 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 ANO3Q9BYT9 981 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 ARHGEF4Q9NR80 690 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 AGPAT3Q9NRZ7 376 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 DNPEPQ9ULA0 475 aa13.71□□□□□ -0.21
GAPVD1-220ENST00000497580 TRIM43BA6NCK2 446 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 VILLO15195 856 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 BTDP43251 543 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 AQP5P55064 265 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 ALCAMQ13740 583 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 RASA3Q14644 834 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 ATP13A4Q4VNC1 1196 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 FBXL19Q6PCT2 694 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 SYDE1Q6ZW31 735 aaPredicted RBP13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 RHPN2Q8IUC4 686 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 CTAGE3PQ8IX95 158 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 SEPT12Q8IYM1 358 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.22
GAPVD1-220ENST00000497580 ATP8B3O60423 1300 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 GLI3P10071 1580 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 LOC100653049A0A140TA62 436 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 KRT34O76011 436 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 EFHC1Q5JVL4 640 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 SLC13A1Q9BZW2 595 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 PCDHGB4Q9UN71 923 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 PCDHGB5Q9Y5G0 923 aa13.7□□□□□ -0.22
GAPVD1-220ENST00000497580 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms