RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 ELMO3Q96BJ8 720 aa11.16□□□□□ -0.62
USP13-205ENST00000497380 HEXIM2Q96MH2 286 aaKnown RBP11.16□□□□□ -0.62
USP13-205ENST00000497380 MRPL45Q9BRJ2 306 aaKnown RBP11.16□□□□□ -0.62
USP13-205ENST00000497380 GPR62Q9BZJ7 368 aa11.16□□□□□ -0.62
USP13-205ENST00000497380 GPR88Q9GZN0 384 aa11.16□□□□□ -0.62
USP13-205ENST00000497380 PDCL3Q9H2J4 239 aa11.16□□□□□ -0.62
USP13-205ENST00000497380 SLC28A3Q9HAS3 691 aa11.16□□□□□ -0.62
USP13-205ENST00000497380 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP13-205ENST00000497380 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
USP13-205ENST00000497380 DDX43Q9NXZ2 648 aaKnown RBP11.16□□□□□ -0.62
USP13-205ENST00000497380 LCHNA4D1U4 455 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 OR6C75A6NL08 312 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 GRXCR1A8MXD5 290 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 I3L4J1 428 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 CYP26A1O43174 497 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 LPXNO60711 386 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 URODP06132 367 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 PDGFRBP09619 1106 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 GNA15P30679 374 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 GLUD2P49448 558 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 RAD23BP54727 409 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 ERVK-21P61565 698 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 ARID5AQ03989 594 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 MRPL58Q14197 206 aaKnown RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 CTXN3Q4LDR2 81 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 SGO2Q562F6 1265 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 TDRD12Q587J7 1177 aaKnown RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 VARS2Q5ST30 1063 aaKnown RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 PPP2R2DQ66LE6 453 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 IRF2BP2Q7Z5L9 587 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 RNF168Q8IYW5 571 aaPredicted RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 DEFB123Q8N688 67 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 KLHL23Q8NBE8 558 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 PBX4Q9BYU1 374 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 SDCBP2Q9H190 292 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 DEF6Q9H4E7 631 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 MRPL17Q9NRX2 175 aaKnown RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 AJAP1Q9UKB5 411 aaPredicted RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 CEP83Q9Y592 693 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 TIMM13Q9Y5L4 95 aaPredicted RBP11.15□□□□□ -0.62
USP13-205ENST00000497380 BACE2Q9Y5Z0 518 aa11.15□□□□□ -0.62
USP13-205ENST00000497380 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 VCANP13611 3396 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 SSU72P8A0A1W2PR75 194 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 F8W810 466 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 THAP12O43422 761 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 EFEMP2O95967 443 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 LINC00271P0C7V0 271 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 CD19P15391 556 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 CYP11B1P15538 503 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 PTPN1P18031 435 aaKnown RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 TNFAIP3P21580 790 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 CLCN1P35523 988 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 ZNF132P52740 706 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 SLC8A3P57103 927 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 DSG1Q02413 1049 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 TAP1Q03518 808 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 NFE2Q16621 373 aaPredicted RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 MEA1Q16626 185 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 FAM109BQ6ICB4 259 aaPredicted RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 PPP1R2P3Q6NXS1 205 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 C4orf50Q6ZRC1 276 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 ACOT1Q86TX2 421 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 TMEM173Q86WV6 379 aaPredicted RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 LRRC8AQ8IWT6 810 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 CCDC170Q8IYT3 715 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 SLC4A11Q8NBS3 891 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 B3GALNT2Q8NCR0 500 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 WHAMMQ8TF30 809 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 RIN2Q8WYP3 895 aaPredicted RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 CCDC42Q96M95 316 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 BAG1Q99933 345 aaPredicted RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 SYT15Q9BQS2 421 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 NGRNQ9NPE2 291 aaKnown RBP11.14□□□□□ -0.63
USP13-205ENST00000497380 HESX1Q9UBX0 185 aa11.14□□□□□ -0.63
USP13-205ENST00000497380 CTSAP10619 480 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 MYOGP15173 224 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 IGFBP6P24592 240 aaPredicted RBP11.13□□□□□ -0.63
USP13-205ENST00000497380 LMO2P25791 158 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 CYLC1P35663 651 aaPredicted RBP11.13□□□□□ -0.63
USP13-205ENST00000497380 SNX16P57768 344 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 CDR2Q01850 454 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 GPM6BQ13491 265 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 CNGA2Q16280 664 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 PSMD5Q16401 504 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 LRIT3Q3SXY7 679 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 INTS6LQ5JSJ4 861 aaKnown RBP11.13□□□□□ -0.63
USP13-205ENST00000497380 ARHGAP17Q68EM7 881 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
USP13-205ENST00000497380 TMC7Q7Z402 723 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms