RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 GAP43P17677 238 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 PDCP20941 246 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 ACOT2P49753 483 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 SATB1Q01826 763 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 ALCAMQ13740 583 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 CCINQ13939 588 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 GAS6Q14393 721 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 OR10T2Q8NGX3 314 aa18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 CACTINQ8WUQ7 758 aaKnown RBP18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 SEPT5Q99719 369 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC3-207ENST00000497251 KPNA7A9QM74 516 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 HAPLN1P10915 354 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 NMT1P30419 496 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 TSPY1Q01534 308 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 KARSQ15046 597 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 CSRP2Q16527 193 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 CMTM8Q8IZV2 173 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 TMEM86AQ8N2M4 240 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 LEO1Q8WVC0 666 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 POMGNT1Q8WZA1 660 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 DDX1Q92499 740 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 LOXL4Q96JB6 756 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 PYM1Q9BRP8 204 aaKnown RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 IL21Q9HBE4 155 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 ABCB6Q9NP58 842 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 UXTQ9UBK9 157 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 PCDHB5Q9Y5E4 795 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 NCANO14594 1321 aa18.17■□□□□ 0.5
TRAPPC3-207ENST00000497251 ANKRD63C9JTQ0 380 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 K7ESF4 209 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 CSH1P0DML2 217 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 CSH2P0DML3 217 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 ATF6P18850 670 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 AVPR1AP37288 418 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 TXLNAP40222 546 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 ZNF268Q14587 947 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 SF3A1Q15459 793 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 STXBP5Q5T5C0 1151 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 PRR23BQ6ZRT6 265 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 WDR5BQ86VZ2 330 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 LRRC3BQ96PB8 259 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 TMEM209Q96SK2 561 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 ACBD6Q9BR61 282 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 GTSE1Q9NYZ3 720 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 PCDHB13Q9Y5F0 798 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 SCN1AP35498 2009 aa18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 NUP210Q8TEM1 1887 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-207ENST00000497251 SLC30A4O14863 429 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 HRO43593 1189 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 PPP1R37O75864 691 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 RPL10AP62906 217 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 GRSF1Q12849 480 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 ZC2HC1CQ53FD0 456 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 WSCD1Q658N2 575 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 TTC9BQ8N6N2 239 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 LRRC52Q8N7C0 313 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 CCDC26Q8TAB7 109 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 LRRC15Q8TF66 581 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 MRPS31Q92665 395 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 ACCSQ96QU6 501 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 FAM83CQ9BQN1 747 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 STRA6Q9BX79 667 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 OLFML3Q9NRN5 406 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 MORC2Q9Y6X9 1032 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 SDK1Q7Z5N4 2213 aa18.15■□□□□ 0.5
TRAPPC3-207ENST00000497251 CHURC1-FNTBB4DL54 471 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 TRDMT1O14717 391 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 KIAA0391O15091 583 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 AKAP3O75969 853 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 GARTP22102 1010 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 FNTBP49356 437 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 NLRP12P59046 1061 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 SPEM2Q0P670 501 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 BFSP1Q12934 665 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 PON2Q15165 354 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 PDGFRLQ15198 375 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 FBXO43Q4G163 708 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 CC2D1AQ6P1N0 951 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 TXNDC11Q6PKC3 985 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 CRELD2Q6UXH1 353 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 SV2BQ7L1I2 683 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 LRRTM3Q86VH5 581 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 MON1AQ86VX9 555 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 CEP295NLQ96MC4 621 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 LPIN3Q9BQK8 851 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 BACH2Q9BYV9 841 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 MRPL44Q9H9J2 332 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 PARD6AQ9NPB6 346 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 GKN1Q9NS71 199 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 SEMA4GQ9NTN9 838 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 TDP1Q9NUW8 608 aa18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 ABI2Q9NYB9 513 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 SRPRBQ9Y5M8 271 aaKnown RBP18.14■□□□□ 0.49
TRAPPC3-207ENST00000497251 HUS1O60921 280 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 SOAT2O75908 522 aa18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 CD2BP2O95400 341 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-207ENST00000497251 PRAMEF12O95522 483 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms