RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SLITRK6Q9H5Y7 841 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 SERHLQ9NQF3 203 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 DKK2Q9UBU2 259 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 MAP3K2Q9Y2U5 619 aa4.91□□□□□ -1.62
SMC4-225ENST00000497203 ABHD14A-ACY1A0A1B0GW23 586 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 CDHR4A6H8M9 788 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 POM121BA6NF01 834 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 TMEM200CA6NKL6 621 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 MARCH11A6NNE9 402 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 ABHD16AO95870 558 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 SPATA31D3P0C874 917 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 GCSHP23434 173 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 TNFSF4P23510 183 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 POU6F2P78424 691 aaPredicted RBP4.9□□□□□ -1.63
SMC4-225ENST00000497203 ZNF543Q08ER8 600 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 KRT72Q14CN4 511 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 IZUMO3Q5VZ72 239 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.63
SMC4-225ENST00000497203 XRRA1Q6P2D8 792 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 KCNV1Q6PIU1 500 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 SPATA31D4Q6ZUB0 917 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 CERS3Q8IU89 383 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 CELF5Q8N6W0 485 aaKnown RBP4.9□□□□□ -1.63
SMC4-225ENST00000497203 AMER2Q8N7J2 671 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 CPEB3Q8NE35 698 aaKnown RBP4.9□□□□□ -1.63
SMC4-225ENST00000497203 SCAMP4Q969E2 229 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 P2RX7Q99572 595 aaKnown RBP4.9□□□□□ -1.63
SMC4-225ENST00000497203 ADAM2Q99965 735 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 MRIQ9BWK5 157 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 GPR35Q9HC97 309 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 SACM1LQ9NTJ5 587 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 ANKFY1Q9P2R3 1169 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 CPNE7Q9UBL6 633 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 ATP11BQ9Y2G3 1177 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMC4-225ENST00000497203 FPGT-TNNI3KV9GXZ4 949 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 AATKQ6ZMQ8 1374 aa4.9□□□□□ -1.63
SMC4-225ENST00000497203 TRIM43BA6NCK2 446 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 UNC119BA6NIH7 251 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 ZNF785A8K8V0 405 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 BTN3A1O00481 513 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 CFIP05156 583 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 PARP1P09874 1014 aaKnown RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 FGFR4P22455 802 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 PHKA1P46020 1223 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 PSMC1P62191 440 aaKnown RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 OCA2Q04671 838 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 CHAF1AQ13111 956 aaPredicted RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 SLC13A2Q13183 592 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 STK3Q13188 491 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 ZRSR2Q15696 482 aaKnown RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 GRAMD1BQ3KR37 738 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 AMOTQ4VCS5 1084 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 NOMO2Q5JPE7 1267 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 FAM209BQ5JX69 171 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 LY6G5CQ5SRR4 150 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 UTP14CQ5TAP6 766 aaKnown RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 B3GNTL1Q67FW5 361 aaPredicted RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 TSHZ1Q6ZSZ6 1077 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 SESTD1Q86VW0 696 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 LDLRAD3Q86YD5 345 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 MYLK4Q86YV6 388 aaPredicted RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 VRK3Q8IV63 474 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 MAPKAPK5Q8IW41 473 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 ULK2Q8IYT8 1036 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 TBC1D15Q8TC07 691 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 IPCEF1Q8WWN9 437 aaPredicted RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 BRI3BPQ8WY22 251 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 TRIM43Q96BQ3 446 aaPredicted RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 ZNF518BQ9C0D4 1074 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 CERS4Q9HA82 394 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 TRMT13Q9NUP7 481 aaKnown RBP4.89□□□□□ -1.63
SMC4-225ENST00000497203 LRCH1Q9Y2L9 728 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 PLEKHM1Q9Y4G2 1056 aa4.89□□□□□ -1.63
SMC4-225ENST00000497203 A0A1B0GTW7 788 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 PRSS29PA6NIE9 313 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 MYO1CO00159 1063 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 AGFG2O95081 481 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 CKBP12277 381 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 TSHRP16473 764 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 DDX6P26196 483 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMC4-225ENST00000497203 BMPR1AP36894 532 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 HSD11B2P80365 405 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 SLFN5Q08AF3 891 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 RESTQ13127 1097 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 USP37Q86T82 979 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 TMEM132CQ8N3T6 1108 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 SDR16C5Q8N3Y7 309 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 CCDC33Q8N5R6 958 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 PCSK9Q8NBP7 692 aaKnown RBP4.88□□□□□ -1.63
SMC4-225ENST00000497203 NUP133Q8WUM0 1156 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 MARS2Q96GW9 593 aaKnown RBP4.88□□□□□ -1.63
SMC4-225ENST00000497203 BRIP1Q9BX63 1249 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 SMURF2Q9HAU4 748 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 STK32BQ9NY57 414 aa4.88□□□□□ -1.63
SMC4-225ENST00000497203 MBD3L4A6NDZ8 208 aaPredicted RBP4.87□□□□□ -1.63
SMC4-225ENST00000497203 MBD3L3A6NE82 208 aaPredicted RBP4.87□□□□□ -1.63
SMC4-225ENST00000497203 F5H423 210 aaPredicted RBP4.87□□□□□ -1.63
SMC4-225ENST00000497203 APOL1O14791 398 aa4.87□□□□□ -1.63
SMC4-225ENST00000497203 PPFIA4O75335 1185 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms