RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 FAM81BQ96LP2 452 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 VPS37BQ9H9H4 285 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 NAV1Q8NEY1 1877 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 CLIC2O15247 247 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 MED24O75448 989 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 PGM3O95394 542 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 MOXD1Q6UVY6 613 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 ANO5Q75V66 913 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 PATL1Q86TB9 770 aaKnown RBP13.64□□□□□ -0.23
VEGFA-215ENST00000497139 LMO3Q8TAP4 145 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 ETNPPLQ8TBG4 499 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 AGAP3Q96P47 875 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 DMAC2Q9NW81 257 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
VEGFA-215ENST00000497139 RAB26Q9ULW5 256 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 SOX13Q9UN79 622 aa13.64□□□□□ -0.23
VEGFA-215ENST00000497139 MAFGO15525 162 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ENO1P06733 434 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 FOLH1Q04609 750 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PPIDQ08752 370 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 MYBPC2Q14324 1141 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 KRT81Q14533 505 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 GRAMD4Q6IC98 578 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TTC7BQ86TV6 843 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TMEM126BQ8IUX1 230 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ERI1Q8IV48 349 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ITPKCQ96DU7 683 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 NOCTQ9UK39 431 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SHOC2Q9UQ13 582 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TTLL13PA6NNM8 815 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 IPO5O00410 1097 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 RPA1P27694 616 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 RFC4P35249 363 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 FDFT1P37268 417 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 NOVP48745 357 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 NR1H2P55055 460 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ASPRV1Q53RT3 343 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 LRRC8BQ6P9F7 803 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 RFX8Q6ZV50 586 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 STXBP4Q6ZWJ1 553 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SLF2Q8IX21 1173 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 CEP70Q8NHQ1 597 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ZFP28Q8NHY6 868 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 EPS8L1Q8TE68 723 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TRPC4APQ8TEL6 797 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 NLRP4Q96MN2 994 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 C7orf26Q96N11 449 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 UBA5Q9GZZ9 404 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PLGRKTQ9HBL7 147 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PICK1Q9NRD5 415 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 DDX18Q9NVP1 670 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ARHGEF38Q9NXL2 777 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TUBA8Q9NY65 449 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 STRIP2Q9ULQ0 834 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PHLPP1O60346 1717 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 CCDC160A6NGH7 325 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 STK10O94804 968 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 CD48P09326 243 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TSHRP16473 764 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 CYP3A7P24462 503 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SNAPC2Q13487 334 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SYCP2LQ5T4T6 812 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 DRICH1Q6PGQ1 229 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 USP17L2Q6R6M4 530 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PACS1Q6VY07 963 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 MZB1Q8WU39 189 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 GJA10Q969M2 543 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 ABHD8Q96I13 439 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 MBOAT7Q96N66 472 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PCDHB18PQ96TA0 734 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 SUN2Q9UH99 717 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 PPME1Q9Y570 386 aa13.63□□□□□ -0.23
VEGFA-215ENST00000497139 A0A088AWK7 358 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 CCDC162PA2VCL2 907 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 TMEM247A6NEH6 219 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 MATN2O00339 956 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 ALDH2P05091 517 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 OGFRL1Q5TC84 451 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-215ENST00000497139 POTEGQ6S5H5 508 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 TMC7Q7Z402 723 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 SLC9A9Q8IVB4 645 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 CATSPER1Q8NEC5 780 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
VEGFA-215ENST00000497139 FAM84BQ96KN1 310 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-215ENST00000497139 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms