RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 SLC35A4Q96G79 324 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 AMBRA1Q9C0C7 1298 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 MRPS18AQ9NVS2 196 aaKnown RBP6.83□□□□□ -1.32
MDM2-220ENST00000496959 PCSK5Q92824 1860 aa6.83□□□□□ -1.32
MDM2-220ENST00000496959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 E2F8A0AVK6 867 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 WDR27A2RRH5 827 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 OFD1O75665 1012 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 C1QL1O75973 258 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 ZNF37AP17032 561 aaPredicted RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 WT1P19544 449 aaPredicted RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 GPD1P21695 349 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 SOX10P56693 466 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 NKX6-1P78426 367 aaPredicted RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 PLS1Q14651 629 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 FAM153CQ494X1 144 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 RBM20Q5T481 1227 aaKnown RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 TSTD2Q5T7W7 516 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 FAM160B1Q5W0V3 765 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 PPP1R32Q7Z5V6 425 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 GRAMD1CQ8IYS0 662 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 MTFMTQ96DP5 389 aaKnown RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 PBKQ96KB5 322 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 PUS7Q96PZ0 661 aaKnown RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 ACTRT3Q9BYD9 372 aa6.82□□□□□ -1.32
MDM2-220ENST00000496959 SARS2Q9NP81 518 aaKnown RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 ARPP21Q9UBL0 812 aaPredicted RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.82□□□□□ -1.32
MDM2-220ENST00000496959 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 LRRC3CA6NJW4 275 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 LINC00473A8K010 186 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 GCOM1H8Y6P7 765 aaPredicted RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 URI1O94763 535 aaPredicted RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 ABLIM3O94929 683 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 TTLL1O95922 423 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 PDGFRBP09619 1106 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 CD6P30203 668 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 IL12RB1P42701 662 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 GCLCP48506 637 aaPredicted RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 TTF1Q15361 905 aaPredicted RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 ATAT1Q5SQI0 421 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 IFIT1BQ5T764 474 aaKnown RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 FAM46DQ8NEK8 389 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 FAM136AQ96C01 138 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 C1GALT1C1Q96EU7 318 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 NELL2Q99435 816 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 DDX56Q9NY93 547 aaKnown RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 EHD3Q9NZN3 535 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 PNMA8BQ9ULN7 279 aaPredicted RBP6.81□□□□□ -1.32
MDM2-220ENST00000496959 STXBP5LQ9Y2K9 1186 aa6.81□□□□□ -1.32
MDM2-220ENST00000496959 VWC2LB2RUY7 222 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 RHOP08100 348 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 EXOSC9Q06265 439 aaKnown RBP6.8□□□□□ -1.32
MDM2-220ENST00000496959 PIN1Q13526 163 aaPredicted RBP6.8□□□□□ -1.32
MDM2-220ENST00000496959 AMOTQ4VCS5 1084 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 PLAC9Q5JTB6 97 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 EMC10Q5UCC4 262 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 FKBP10Q96AY3 582 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 SARAFQ96BY9 339 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 HAPLN3Q96S86 360 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 ST3GAL5Q9UNP4 418 aa6.8□□□□□ -1.32
MDM2-220ENST00000496959 ELFN1P0C7U0 828 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 NR2F6P10588 404 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 PIM1P11309 404 aaPredicted RBP6.79□□□□□ -1.32
MDM2-220ENST00000496959 NCLP19338 710 aaKnown RBP6.79□□□□□ -1.32
MDM2-220ENST00000496959 KCNJ5P48544 419 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 TOB1P50616 345 aaPredicted RBP6.79□□□□□ -1.32
MDM2-220ENST00000496959 SOX8P57073 446 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 COLEC12Q5KU26 742 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 SFRP4Q6FHJ7 346 aaPredicted RBP6.79□□□□□ -1.32
MDM2-220ENST00000496959 LAYNQ6UX15 382 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 PCSK9Q8NBP7 692 aaKnown RBP6.79□□□□□ -1.32
MDM2-220ENST00000496959 CGRRF1Q99675 332 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 CNNM1Q9NRU3 951 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 PCDHA6Q9UN73 950 aa6.79□□□□□ -1.32
MDM2-220ENST00000496959 ALDH2P05091 517 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 ZFXP17010 805 aaPredicted RBP6.78□□□□□ -1.32
MDM2-220ENST00000496959 HDCP19113 662 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 MCL1Q07820 350 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 TBCCQ15814 346 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 TEDDM1Q5T9Z0 273 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 TMEM108Q6UXF1 575 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 FAM109AQ8N4B1 249 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 CAMKK1Q8N5S9 505 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 KLHDC4Q8TBB5 520 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 RFKQ969G6 155 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 SLC46A1Q96NT5 459 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 HESX1Q9UBX0 185 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 WNT6Q9Y6F9 365 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 ERCC6Q03468 1493 aa6.78□□□□□ -1.32
MDM2-220ENST00000496959 AP1G1O43747 822 aa6.77□□□□□ -1.33
MDM2-220ENST00000496959 NXPH3O95157 252 aa6.77□□□□□ -1.33
MDM2-220ENST00000496959 ATXN1LP0C7T5 689 aaKnown RBP6.77□□□□□ -1.33
MDM2-220ENST00000496959 HSPA6P17066 643 aa6.77□□□□□ -1.33
MDM2-220ENST00000496959 LONRF3Q496Y0 759 aa6.77□□□□□ -1.33
MDM2-220ENST00000496959 RASAL3Q86YV0 1011 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms