RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 MYO1EQ12965 1108 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 SNW1Q13573 536 aaKnown RBP12.72□□□□□ -0.37
THBS3-208ENST00000496332 PSMD6Q15008 389 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 TEAD2Q15562 447 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 TRAPPC11Q7Z392 1133 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 TOP6BLQ8N6T0 577 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 GOLGA5Q8TBA6 731 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 FAM200AQ8TCP9 573 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 SPPL2BQ8TCT7 592 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 SMARCD2Q92925 531 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 PSMG2Q969U7 264 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 ASB16Q96NS5 453 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 LPIN3Q9BQK8 851 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 ACBD6Q9BR61 282 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 TBC1D17Q9HA65 648 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
THBS3-208ENST00000496332 TMLHEQ9NVH6 421 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
THBS3-208ENST00000496332 ABI2Q9NYB9 513 aaPredicted RBP12.72□□□□□ -0.37
THBS3-208ENST00000496332 TSC2P49815 1807 aa12.72□□□□□ -0.37
THBS3-208ENST00000496332 H0Y858 1186 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 EXOC3O60645 756 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 HAPLN1P10915 354 aaPredicted RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 ATF6P18850 670 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 LHX1P48742 406 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 PFKPQ01813 784 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 OSTM1Q86WC4 334 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 ZSCAN18Q8TBC5 510 aaPredicted RBP12.71□□□□□ -0.37
THBS3-208ENST00000496332 GIPC2Q8TF65 315 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 SHDQ96IW2 340 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 CGRRF1Q99675 332 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 GPR88Q9GZN0 384 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 IRF2BPLQ9H1B7 796 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 GOLPH3LQ9H4A5 285 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 SLITRK6Q9H5Y7 841 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.37
THBS3-208ENST00000496332 GABRDO14764 452 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 HCRTO43612 131 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 FGF19O95750 216 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 GABRR2P28476 465 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 VIPR2P41587 438 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 STARD6P59095 220 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 GRM2Q14416 872 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 MLF2Q15773 248 aaPredicted RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 TAF12Q16514 161 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 NFE2Q16621 373 aaPredicted RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 STXBP5Q5T5C0 1151 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 KRBA2Q6ZNG9 492 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 GAREM2Q75VX8 874 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 DPH6Q7L8W6 267 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 CCDC47Q96A33 483 aaKnown RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 GZF1Q9H116 711 aaPredicted RBP12.7□□□□□ -0.38
THBS3-208ENST00000496332 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 ATXN3LQ9H3M9 355 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 TRPV4Q9HBA0 871 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 DMAC2Q9NW81 257 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
THBS3-208ENST00000496332 PDXKO00764 312 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 ZNF202O95125 648 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 PCSK1P29120 753 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 CASP4P49662 377 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 GPR15P49685 360 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 NUCB2P80303 420 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 PRKCQQ04759 706 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 DPYDQ12882 1025 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 VITQ6UXI7 678 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 SLC9A9Q8IVB4 645 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 DTWD2Q8NBA8 298 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 KBTBD7Q8WVZ9 684 aa12.69□□□□□ -0.38
THBS3-208ENST00000496332 MMS19Q96T76 1030 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms