RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 LRRTM3Q86VH5 581 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 ADGRF2Q8IZF7 708 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 HS6ST3Q8IZP7 471 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
COMMD3-214ENST00000496071 PARD3BQ8TEW8 1205 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 PSMG2Q969U7 264 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 SLC2A4RGQ9NR83 387 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 RMND1Q9NWS8 449 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 HOOK1Q9UJC3 728 aaKnown RBP18.3■□□□□ 0.52
COMMD3-214ENST00000496071 FRMD4BQ9Y2L6 1034 aa18.3■□□□□ 0.52
COMMD3-214ENST00000496071 ECI2O75521 394 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
COMMD3-214ENST00000496071 CST3P01034 146 aaPredicted RBP18.29■□□□□ 0.52
COMMD3-214ENST00000496071 CFHP08603 1231 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 HAPLN1P10915 354 aaPredicted RBP18.29■□□□□ 0.52
COMMD3-214ENST00000496071 AVPR2P30518 371 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 ATICP31939 592 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 FAM160A1Q05DH4 1040 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 NFIL3Q16649 462 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
COMMD3-214ENST00000496071 LIMS2Q7Z4I7 341 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 DNAJB7Q7Z6W7 309 aaPredicted RBP18.29■□□□□ 0.52
COMMD3-214ENST00000496071 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 ZNF516Q92618 1163 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 TCEAL4Q96EI5 215 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 SEPT5Q99719 369 aaPredicted RBP18.29■□□□□ 0.52
COMMD3-214ENST00000496071 LRRC3Q9BY71 257 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
COMMD3-214ENST00000496071 MAPK13O15264 365 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 ABCB7O75027 752 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 PHACTR2O75167 634 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 PDGFBP01127 241 aaPredicted RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 RPL13P26373 211 aaKnown RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 CCR2P41597 374 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 CLCN5P51795 746 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 NUBP1P53384 320 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 CLDN10P78369 228 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 SNW1Q13573 536 aaKnown RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 TTC9BQ8N6N2 239 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 FAM200AQ8TCP9 573 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 TMC2Q8TDI7 906 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 ELSPBP1Q96BH3 223 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 GSDMAQ96QA5 445 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 MMS19Q96T76 1030 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 RPP25Q9BUL9 199 aaKnown RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 GTPBP4Q9BZE4 634 aaKnown RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 ABCB6Q9NP58 842 aa18.28■□□□□ 0.52
COMMD3-214ENST00000496071 ABI2Q9NYB9 513 aaPredicted RBP18.28■□□□□ 0.52
COMMD3-214ENST00000496071 KMT2EQ8IZD2 1858 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 MOSPD3O75425 235 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 SMC2O95347 1197 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 WARSP23381 471 aaKnown RBP18.27■□□□□ 0.52
COMMD3-214ENST00000496071 TAF12Q16514 161 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 CEP135Q66GS9 1140 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 ASTLQ6HA08 431 aaPredicted RBP18.27■□□□□ 0.52
COMMD3-214ENST00000496071 OSTM1Q86WC4 334 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 TMC8Q8IU68 726 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 SIX5Q8N196 739 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 GPR152Q8TDT2 470 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 ZFP14Q9HCL3 533 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 CDH9Q9ULB4 789 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 MAPK8IP1Q9UQF2 711 aa18.27■□□□□ 0.52
COMMD3-214ENST00000496071 ZNF318Q5VUA4 2279 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 IKBKBO14920 756 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 TACC1O75410 805 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 SOAT2O75908 522 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 ATF6P18850 670 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 ACAT1P24752 427 aaKnown RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 CASP4P49662 377 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 RPL10AP62906 217 aaKnown RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 TNNC1P63316 161 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 GPC5P78333 572 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 PFKPQ01813 784 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 BIRC3Q13489 604 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 PNOCQ13519 176 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 MAPRE1Q15691 268 aaKnown RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 WDR72Q3MJ13 1102 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 SPATA2LQ8IUW3 424 aaPredicted RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 ELOA2Q8IYF1 753 aaPredicted RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 ST13P5Q8NFI4 369 aaPredicted RBP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 SHKBP1Q8TBC3 707 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 PLEKHO2Q8TD55 490 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 KBTBD7Q8WVZ9 684 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 SMARCD2Q92925 531 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 E2F7Q96AV8 911 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 FUBP3Q96I24 572 aaKnown RBP eCLIP18.26■□□□□ 0.51
COMMD3-214ENST00000496071 ASB16Q96NS5 453 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 KXD1Q9BQD3 176 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 VRTNQ9H8Y1 702 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 TMLHEQ9NVH6 421 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 GTF3C4Q9UKN8 822 aa18.26■□□□□ 0.51
COMMD3-214ENST00000496071 A0A1W2PRU2 124 aa18.25■□□□□ 0.51
COMMD3-214ENST00000496071 C4BPAP04003 597 aaKnown RBP18.25■□□□□ 0.51
COMMD3-214ENST00000496071 GJA1P17302 382 aa18.25■□□□□ 0.51
COMMD3-214ENST00000496071 NR2F2P24468 414 aa18.25■□□□□ 0.51
COMMD3-214ENST00000496071 VCPP55072 806 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms