RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ACBD6Q9BR61 282 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 IMPG2Q9BZV3 1241 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 CRISPLD1Q9H336 500 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 SFXN1Q9H9B4 322 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 CYP4F11Q9HBI6 524 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 AFF4Q9UHB7 1163 aaKnown RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 COQ4Q9Y3A0 265 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 CCDC195A0A1B0GUA6 201 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 MTMR11A4FU01 709 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 MBTPS2O43462 519 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 ZMYND10O75800 440 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 ELF1P32519 619 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 PSMC1P62191 440 aaKnown RBP20.79■□□□□ 0.92
HDAC4-212ENST00000495497 LRMPQ12912 555 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 PPM1LQ5SGD2 360 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 LIN9Q5TKA1 542 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 TPGS2Q68CL5 300 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 FAM114A1Q8IWE2 563 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 AOPEPQ8N6M6 819 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 ATAD1Q8NBU5 361 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 CCDC150Q8NCX0 1101 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 SPATA18Q8TC71 538 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 DPEP3Q9H4B8 488 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 FANCLQ9NW38 375 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 MAGEC2Q9UBF1 373 aaPredicted RBP20.79■□□□□ 0.92
HDAC4-212ENST00000495497 DPP7Q9UHL4 492 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 GTF3C4Q9UKN8 822 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 SLC27A5Q9Y2P5 690 aa20.79■□□□□ 0.92
HDAC4-212ENST00000495497 USP15Q9Y4E8 981 aaPredicted RBP20.79■□□□□ 0.92
HDAC4-212ENST00000495497 KCNJ18B7U540 433 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 PRRG1O14668 218 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 CCL16O15467 120 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 N4BP1O75113 896 aaKnown RBP20.78■□□□□ 0.92
HDAC4-212ENST00000495497 P4HA1P13674 534 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 IL9P15248 144 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 TSPY1Q01534 308 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 DUSP4Q13115 394 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 SMAD4Q13485 552 aaKnown RBP20.78■□□□□ 0.92
HDAC4-212ENST00000495497 KCNJ12Q14500 433 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 WDR44Q5JSH3 913 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 INTS6LQ5JSJ4 861 aaKnown RBP20.78■□□□□ 0.92
HDAC4-212ENST00000495497 DCP1BQ8IZD4 617 aaKnown RBP20.78■□□□□ 0.92
HDAC4-212ENST00000495497 TTC9BQ8N6N2 239 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 ZNF707Q96C28 371 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-212ENST00000495497 ASB2Q96Q27 587 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 PKMYT1Q99640 499 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 SYT15Q9BQS2 421 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 NIF3L1Q9GZT8 377 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 ADAM7Q9H2U9 754 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 BRWD1Q9NSI6 2320 aa20.78■□□□□ 0.92
HDAC4-212ENST00000495497 MYBPHLA2RUH7 354 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 A8MXQ7 604 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 PMM2O15305 246 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 SOAT2O75908 522 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 FAM163BP0C2L3 166 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 PCSK1P29120 753 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 MYL5Q02045 173 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 ORC1Q13415 861 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 NCAPHQ15003 741 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 AAK1Q2M2I8 961 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 CDKAL1Q5VV42 579 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 ELMSAN1Q6PJG2 1045 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 TCEAL8Q8IYN2 117 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 LMO3Q8TAP4 145 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 BCO2Q9BYV7 579 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 CRTAC1Q9NQ79 661 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 HMGXB4Q9UGU5 601 aa20.77■□□□□ 0.92
HDAC4-212ENST00000495497 P4HA2O15460 535 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 PRKCSHP14314 528 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-212ENST00000495497 CD58P19256 250 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 ITIH3Q06033 890 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 UVSSAQ2YD98 709 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 TCP11X2Q5H9J9 407 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 CCDC149Q6ZUS6 474 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 GPR149Q86SP6 731 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 EHBP1Q8NDI1 1231 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 SUSD6Q92537 303 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 ARID3AQ99856 593 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 TUBGCP2Q9BSJ2 902 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 PRKD2Q9BZL6 878 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 ZDHHC7Q9NXF8 308 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 ABI2Q9NYB9 513 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-212ENST00000495497 CDH9Q9ULB4 789 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 INSL5Q9Y5Q6 135 aa20.76■□□□□ 0.91
HDAC4-212ENST00000495497 BMP1P13497 986 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 PTPN1P18031 435 aaKnown RBP20.75■□□□□ 0.91
HDAC4-212ENST00000495497 NDST1P52848 882 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 MAN2A1Q16706 1144 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 MDH1BQ5I0G3 518 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 MIIPQ5JXC2 388 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 CES5AQ6NT32 575 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 FAM171BQ6P995 826 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 DHX40Q8IX18 779 aaKnown RBP20.75■□□□□ 0.91
HDAC4-212ENST00000495497 CMASQ8NFW8 434 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-212ENST00000495497 SMG7Q92540 1137 aaKnown RBP20.75■□□□□ 0.91
HDAC4-212ENST00000495497 CRACR2AQ9BSW2 395 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 RHOBTB2Q9BYZ6 727 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 NAT10Q9H0A0 1025 aaKnown RBP20.75■□□□□ 0.91
HDAC4-212ENST00000495497 TAB2Q9NYJ8 693 aa20.75■□□□□ 0.91
HDAC4-212ENST00000495497 PCDHB5Q9Y5E4 795 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms