RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ATP2C2O75185 946 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 CST3P01034 146 aaPredicted RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 GLULP15104 373 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 RFX1P22670 979 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 CMA1P23946 247 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 CASP4P49662 377 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 EPHB3P54753 998 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 RBP5P82980 135 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 CYP4F8P98187 520 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 SNRNP35Q16560 246 aaKnown RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 SLC44A4Q53GD3 710 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 VITQ6UXI7 678 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 DNAJB7Q7Z6W7 309 aaPredicted RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 THEM5Q8N1Q8 247 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 ZSCAN18Q8TBC5 510 aaPredicted RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 FAM200AQ8TCP9 573 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 ATOH1Q92858 354 aaPredicted RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 CCDC127Q96BQ5 260 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 ANKRD36BP1Q96IX9 119 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 OXCT2Q9BYC2 517 aaPredicted RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 SLITRK6Q9H5Y7 841 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 HEBP1Q9NRV9 189 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 DDX43Q9NXZ2 648 aaKnown RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 ITGA11Q9UKX5 1188 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 DSEQ9UL01 958 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 MAFFQ9ULX9 164 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 NME7Q9Y5B8 376 aa11.42□□□□□ -0.58
NELFE-213ENST00000494956 KIF26AQ9ULI4 1882 aaPredicted RBP11.42□□□□□ -0.58
NELFE-213ENST00000494956 ZNF638Q14966 1978 aaKnown RBP11.41□□□□□ -0.58
NELFE-213ENST00000494956 NUP210Q8TEM1 1887 aaPredicted RBP11.41□□□□□ -0.58
NELFE-213ENST00000494956 SHISA7A6NL88 538 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 HUS1O60921 280 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 ECI2O75521 394 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 HAPLN1P10915 354 aaPredicted RBP11.41□□□□□ -0.58
NELFE-213ENST00000494956 TNNI1P19237 187 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 LMO2P25791 158 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 GABRR2P28476 465 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 PNPLA4P41247 253 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 NUBP1P53384 320 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 PSMC1P62191 440 aaKnown RBP11.41□□□□□ -0.58
NELFE-213ENST00000494956 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 PLD1Q13393 1074 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 GSE1Q14687 1217 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 MLF2Q15773 248 aaPredicted RBP11.41□□□□□ -0.58
NELFE-213ENST00000494956 KNOP1Q1ED39 458 aaKnown RBP11.41□□□□□ -0.58
NELFE-213ENST00000494956 BMT2Q1RMZ1 405 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 CCDC105Q8IYK2 499 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 ADGRF2Q8IZF7 708 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 LRRC52Q8N7C0 313 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 FSIP1Q8NA03 581 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 DTWD2Q8NBA8 298 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 XXYLT1Q8NBI6 393 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 PSMG2Q969U7 264 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 ELSPBP1Q96BH3 223 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 HPDLQ96IR7 371 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 LRRC3BQ96PB8 259 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 ATXN3LQ9H3M9 355 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 ZFP14Q9HCL3 533 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 EXOC1Q9NV70 894 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 GDAP2Q9NXN4 497 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 GTF3C4Q9UKN8 822 aa11.41□□□□□ -0.58
NELFE-213ENST00000494956 UBE4BO95155 1302 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 MYBPHLA2RUH7 354 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
NELFE-213ENST00000494956 PRPF40AO75400 957 aaKnown RBP11.4□□□□□ -0.58
NELFE-213ENST00000494956 TNNC2P02585 160 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PDGFRBP09619 1106 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PAX3P23760 479 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 CYP2F1P24903 491 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 SYKP43405 635 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 STARD6P59095 220 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 UBXN2BQ14CS0 331 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PSMD6Q15008 389 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 ANGPT1Q15389 498 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 DDR2Q16832 855 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 DUOXA2Q1HG44 320 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 INTS6LQ5JSJ4 861 aaKnown RBP11.4□□□□□ -0.58
NELFE-213ENST00000494956 GPR158Q5T848 1215 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 TPRG1Q6ZUI0 275 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 WDR49Q8IV35 697 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 DCP1BQ8IZD4 617 aaKnown RBP11.4□□□□□ -0.58
NELFE-213ENST00000494956 KBTBD7Q8WVZ9 684 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 SMARCD2Q92925 531 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PKMYT1Q99640 499 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 CGRRF1Q99675 332 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PRRX2Q99811 253 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 MRPL45Q9BRJ2 306 aaKnown RBP11.4□□□□□ -0.58
NELFE-213ENST00000494956 SMG9Q9H0W8 520 aaKnown RBP11.4□□□□□ -0.58
NELFE-213ENST00000494956 DLGAP2Q9P1A6 1054 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 MAPK8IP1Q9UQF2 711 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 SIT1Q9Y3P8 196 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PTPRDP23468 1912 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 GREB1Q4ZG55 1949 aa11.4□□□□□ -0.58
NELFE-213ENST00000494956 PATJQ8NI35 1801 aa11.39□□□□□ -0.59
NELFE-213ENST00000494956 HEPACAM2A8MVW5 462 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms