RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 LONP1P36776 959 aaKnown RBP13.66□□□□□ -0.22
SKA1-205ENST00000494518 GPR15P49685 360 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 TAF6P49848 677 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 NRLP54845 237 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 WNT7BP56706 349 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 GTF2BQ00403 316 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 LRRC32Q14392 662 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 VEPH1Q14D04 833 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 TAF12Q16514 161 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 SDHAF4Q5VUM1 108 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 METTL23Q86XA0 190 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 CD302Q8IX05 232 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 KCNN1Q92952 543 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 BORCS6Q96GS4 357 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
SKA1-205ENST00000494518 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
SKA1-205ENST00000494518 MYBPHLA2RUH7 354 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 SLC26A4O43511 780 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 HRO43593 1189 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 CYP11A1P05108 521 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 LMNB2Q03252 620 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 KCNA1Q09470 495 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 SIM2Q14190 667 aaPredicted RBP13.65□□□□□ -0.22
SKA1-205ENST00000494518 ARHGAP29Q52LW3 1261 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 SCARA3Q6AZY7 606 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 CRELD2Q6UXH1 353 aaPredicted RBP13.65□□□□□ -0.22
SKA1-205ENST00000494518 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 SPEM1Q8N4L4 309 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 GPR161Q8N6U8 529 aaKnown RBP13.65□□□□□ -0.22
SKA1-205ENST00000494518 KRI1Q8N9T8 703 aaKnown RBP13.65□□□□□ -0.22
SKA1-205ENST00000494518 TTC16Q8NEE8 873 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
SKA1-205ENST00000494518 POMGNT1Q8WZA1 660 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 SAAL1Q96ER3 474 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 IER2Q9BTL4 223 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 TASP1Q9H6P5 420 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 TMLHEQ9NVH6 421 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 DERAQ9Y315 318 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 CLIC4Q9Y696 253 aa13.65□□□□□ -0.22
SKA1-205ENST00000494518 K7ESF4 209 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 ADSSP30520 456 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 PXNP49023 591 aaPredicted RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 TRIM68Q6AZZ1 485 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 LAIR1Q6GTX8 287 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 PKN3Q6P5Z2 889 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 BRAPQ7Z569 592 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 RALGPS2Q86X27 583 aaPredicted RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 CELF5Q8N6W0 485 aaKnown RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 PI4K2AQ9BTU6 479 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 SLC46A2Q9BY10 475 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 ASB7Q9H672 318 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 DSEQ9UL01 958 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 MAGED2Q9UNF1 606 aaPredicted RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 CCL26Q9Y258 94 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 C2CD2Q9Y426 696 aa13.64□□□□□ -0.23
SKA1-205ENST00000494518 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
SKA1-205ENST00000494518 HELZP42694 1942 aaKnown RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 KIAA1549LQ6ZVL6 1849 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 GOLGA8IPA6NC78 632 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MYMKA6NI61 221 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 GOLGA8JA6NMD2 632 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 PRR5-ARHGAP8B1AHC4 643 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 FGF19O95750 216 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 BMP15O95972 392 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 SCP2P22307 547 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 CDC25CP30307 473 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 POLR2BP30876 1174 aaKnown RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 DDIT3P35638 169 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MCM2P49736 904 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 ARHGAP8P85298 464 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 CEBPZQ03701 1054 aaKnown RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 SLFN12LQ6IEE8 588 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 CEP68Q76N32 757 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MAB21L3Q8N8X9 362 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 SPPL2BQ8TCT7 592 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 CLIC6Q96NY7 704 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MRPL44Q9H9J2 332 aaKnown RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 GKN1Q9NS71 199 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 POLR3BQ9NW08 1133 aaPredicted RBP13.63□□□□□ -0.23
SKA1-205ENST00000494518 STYXL1Q9Y6J8 313 aa13.63□□□□□ -0.23
SKA1-205ENST00000494518 MYOFQ9NZM1 2061 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms