RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NAA30Q147X3 362 aaPredicted RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 RPS6KA1Q15418 735 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 ERCC6LQ2NKX8 1250 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TWF2Q6IBS0 349 aaKnown RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 CD300LGQ6UXG3 332 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 CTAGE6Q86UF2 777 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 CTAGE4Q8IX94 777 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 NIPA2Q8N8Q9 360 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TMEM35BQ8NCS4 154 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 MNS1Q8NEH6 495 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 SPATA4Q8NEY3 305 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 FNIP1Q8TF40 1166 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 CPA5Q8WXQ8 436 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TOX2Q96NM4 488 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TRIM6Q9C030 488 aaPredicted RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 UNC93B1Q9H1C4 597 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TRPV6Q9H1D0 765 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 WNT8AQ9H1J5 351 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 CARD9Q9H257 536 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 ELAC1Q9H777 363 aaKnown RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 CYLDQ9NQC7 956 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 STARD7Q9NQZ5 370 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 NXF1Q9UBU9 619 aaKnown RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 CNOT8Q9UFF9 292 aaKnown RBP7.22□□□□□ -1.25
MSH5-217ENST00000494458 CYTH4Q9UIA0 394 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 AMFRQ9UKV5 643 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TRIM17Q9Y577 477 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 PCDHA3Q9Y5H8 950 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 FRMPD3Q5JV73 1810 aa7.22□□□□□ -1.25
MSH5-217ENST00000494458 TARSL2A2RTX5 802 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 ARL5CA6NH57 179 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 SIGLEC16A6NMB1 481 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 TMCO5BA8MYB1 307 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 THAP12O43422 761 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 NCK2O43639 380 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 PROSCO94903 275 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 CXCL10P02778 98 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 CYP11A1P05108 521 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 CALB1P05937 261 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 THP07101 528 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 KRT19P08727 400 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 SETSIPP0DME0 302 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ITGA4P13612 1032 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 HSPA6P17066 643 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ABCB4P21439 1286 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 RRM1P23921 792 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 BRD2P25440 801 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 CTNNA1P35221 906 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 NOP2P46087 812 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 NSFP46459 744 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 TAF6P49848 677 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 NDST1P52848 882 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 TAP1Q03518 808 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 CKAP4Q07065 602 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 UPP1Q16831 310 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 CFAP221Q4G0U5 840 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 LRRC38Q5VT99 294 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 DCAF12L1Q5VU92 463 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 NAA35Q5VZE5 725 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 WDR93Q6P2C0 686 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 DENND1BQ6P3S1 775 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ARCQ7LC44 396 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 PEX26Q7Z412 305 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 DAAM2Q86T65 1068 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 TMEM110Q86TL2 294 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ECHDC2Q86YB7 292 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 HACE1Q8IYU2 909 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 NOA1Q8NC60 698 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 C3orf20Q8ND61 904 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ZNF564Q8TBZ8 553 aaPredicted RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 SLC35F5Q8WV83 523 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 HNRNPLLQ8WVV9 542 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 LINC01599Q8WXQ3 324 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 RSPH1Q8WYR4 309 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 UBXN4Q92575 508 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 RUBCNQ92622 972 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ARMC5Q96C12 935 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ZNF653Q96CK0 615 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 MCRS1Q96EZ8 462 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 DDX27Q96GQ7 796 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 ZFP42Q96MM3 310 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ZNF560Q96MR9 790 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 MRPL45Q9BRJ2 306 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 NUP85Q9BW27 656 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 NT5C1AQ9BXI3 368 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 FTHL17Q9BXU8 183 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 SLC4A5Q9BY07 1137 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ANKZF1Q9H8Y5 726 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 MRPL47Q9HD33 250 aaKnown RBP7.21□□□□□ -1.26
MSH5-217ENST00000494458 RNF19AQ9NV58 838 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 PARVAQ9NVD7 372 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 PLA2G2EQ9NZK7 142 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 ADAM22Q9P0K1 906 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 CTTNBP2NLQ9P2B4 639 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 WDR35Q9P2L0 1181 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 PARP2Q9UGN5 583 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 HMGXB4Q9UGU5 601 aa7.21□□□□□ -1.26
MSH5-217ENST00000494458 SCN1AP35498 2009 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms