RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 FAM200AQ8TCP9 573 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 GPR152Q8TDT2 470 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 PARD3BQ8TEW8 1205 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 GIPC2Q8TF65 315 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 KBTBD7Q8WVZ9 684 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 EEF2KMTQ96G04 330 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 CCDC34Q96HJ3 373 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 PI4K2AQ9BTU6 479 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 ZNF334Q9HCZ1 680 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-224ENST00000494132 ASAH2Q9NR71 780 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 DUSP12Q9UNI6 340 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 TRAF3IP3Q9Y228 551 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 PCDHA5Q9Y5H7 936 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 TICRRQ7Z2Z1 1910 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 ANAPC1Q9H1A4 1944 aa15.78■□□□□ 0.12
ATG4B-224ENST00000494132 KIF26AQ9ULI4 1882 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-224ENST00000494132 MIA3Q5JRA6 1907 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 ANHXE9PGG2 379 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 ATP2C2O75185 946 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 PRPF40AO75400 957 aaKnown RBP15.77■□□□□ 0.12
ATG4B-224ENST00000494132 MOSPD3O75425 235 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 KIF20AO95235 890 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 LMO2P25791 158 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 ANP32AP39687 249 aaKnown RBP15.77■□□□□ 0.12
ATG4B-224ENST00000494132 EPHB3P54753 998 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 MYL7Q01449 175 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 TRPC3Q13507 836 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 INTS6LQ5JSJ4 861 aaKnown RBP15.77■□□□□ 0.12
ATG4B-224ENST00000494132 CYP4A22Q5TCH4 519 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 SDHAF4Q5VUM1 108 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 TMC8Q8IU68 726 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 SLC9A9Q8IVB4 645 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 TMEM86AQ8N2M4 240 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 GUF1Q8N442 669 aaKnown RBP15.77■□□□□ 0.12
ATG4B-224ENST00000494132 TOP6BLQ8N6T0 577 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 MRPL45Q9BRJ2 306 aaKnown RBP15.77■□□□□ 0.12
ATG4B-224ENST00000494132 MMRN2Q9H8L6 949 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.77■□□□□ 0.12
ATG4B-224ENST00000494132 GTF3C4Q9UKN8 822 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 MAFFQ9ULX9 164 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 NME7Q9Y5B8 376 aa15.77■□□□□ 0.12
ATG4B-224ENST00000494132 A0A1W2PRU2 124 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 MYBPHLA2RUH7 354 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 AKAP3O75969 853 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 PDGFRBP09619 1106 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 PRCPP42785 496 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 VCPP55072 806 aaKnown RBP15.76■□□□□ 0.11
ATG4B-224ENST00000494132 PLD1Q13393 1074 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 TEAD2Q15562 447 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 WDR72Q3MJ13 1102 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 STXBP5Q5T5C0 1151 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 GPIHBP1Q8IV16 184 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 DCP1BQ8IZD4 617 aaKnown RBP15.76■□□□□ 0.11
ATG4B-224ENST00000494132 SHKBP1Q8TBC3 707 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 SMARCE1Q969G3 411 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 ZSWIM3Q96MP5 696 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 LRRC3Q9BY71 257 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 NXF1Q9UBU9 619 aaKnown RBP15.76■□□□□ 0.11
ATG4B-224ENST00000494132 FBXL21Q9UKT6 434 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 CA14Q9ULX7 337 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 FRMD4BQ9Y2L6 1034 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 HCN4Q9Y3Q4 1203 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 PCDHB5Q9Y5E4 795 aa15.76■□□□□ 0.11
ATG4B-224ENST00000494132 ZFP37Q9Y6Q3 630 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-224ENST00000494132 GABRDO14764 452 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 KINO60870 393 aaKnown RBP15.75■□□□□ 0.11
ATG4B-224ENST00000494132 VNN1O95497 513 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 C4BPAP04003 597 aaKnown RBP15.75■□□□□ 0.11
ATG4B-224ENST00000494132 TRIM49P0CI25 452 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 TRIM49CP0CI26 452 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 HAPLN1P10915 354 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-224ENST00000494132 RAP1GAPP47736 663 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 TNNC1P63316 161 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 ZCWPW2Q504Y3 356 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 C1orf220Q5T0J3 134 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 SCARA5Q6ZMJ2 495 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 DNAJB7Q7Z6W7 309 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-224ENST00000494132 SUGP1Q8IWZ8 645 aaKnown RBP15.75■□□□□ 0.11
ATG4B-224ENST00000494132 FBXL6Q8N531 539 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 SPPL2BQ8TCT7 592 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 TIGD1Q96MW7 591 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 PKMYT1Q99640 499 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 SYT15Q9BQS2 421 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 PLA2G2FQ9BZM2 168 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 XYLT2Q9H1B5 865 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 AVENQ9NQS1 362 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-224ENST00000494132 RMND1Q9NWS8 449 aa15.75■□□□□ 0.11
ATG4B-224ENST00000494132 TRIM49BA6NDI0 452 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 ZNF197O14709 1029 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 SMC2O95347 1197 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 CYP2F1P24903 491 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 GABRR2P28476 465 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 LHX1P48742 406 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 TUFMP49411 452 aaKnown RBP15.74■□□□□ 0.11
ATG4B-224ENST00000494132 PMS1P54277 932 aaKnown RBP15.74■□□□□ 0.11
ATG4B-224ENST00000494132 EPHA5P54756 1037 aa15.74■□□□□ 0.11
ATG4B-224ENST00000494132 GPC5P78333 572 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms