RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SLC8B1Q6J4K2 584 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 GJB7Q6PEY0 223 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 RSPO2Q6UXX9 243 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-223ENST00000494123 ADGRD2Q7Z7M1 963 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 UNC93AQ86WB7 457 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 DCP1BQ8IZD4 617 aaKnown RBP15.54■□□□□ 0.08
BRCA1-223ENST00000494123 OR10T2Q8NGX3 314 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 KAT5Q92993 513 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 RTP3Q9BQQ7 232 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 TRIM5Q9C035 493 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 DNAJC12Q9UKB3 198 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 CDH9Q9ULB4 789 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 SIK3Q9Y2K2 1263 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 A0A1W2PQC6 194 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 PER2O15055 1255 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 HCRTO43612 131 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 TBC1D4O60343 1298 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 CILPO75339 1184 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 OR4Q2P0C623 313 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 FOSL2P15408 326 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 POU3F3P20264 500 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-223ENST00000494123 NRIP1P48552 1158 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 NDST1P52848 882 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 INCA1Q0VD86 236 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 RAPGEF1Q13905 1077 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 PTPN21Q16825 1174 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 INTS6LQ5JSJ4 861 aaKnown RBP15.54■□□□□ 0.08
BRCA1-223ENST00000494123 PPFIBP1Q86W92 1011 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 PALB2Q86YC2 1186 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 JAKMIP2Q96AA8 810 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 TNIP3Q96KP6 325 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 SYT15Q9BQS2 421 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 NT5C1AQ9BXI3 368 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 PCDHB4Q9Y5E5 795 aa15.54■□□□□ 0.08
BRCA1-223ENST00000494123 MYO7AQ13402 2215 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 ADAM12O43184 909 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 CLASP2O75122 1294 aaKnown RBP15.53■□□□□ 0.08
BRCA1-223ENST00000494123 KRT5P13647 590 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 UCHL3P15374 230 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 PSMC1P62191 440 aaKnown RBP15.53■□□□□ 0.08
BRCA1-223ENST00000494123 ROR1Q01973 937 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 RAB33AQ14088 237 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 ZNF394Q53GI3 561 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 IQCEQ6IPM2 695 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 SARM1Q6SZW1 724 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 KREMEN1Q96MU8 473 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 GUCD1Q96NT3 240 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 TMEM209Q96SK2 561 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 CDCA3Q99618 268 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-223ENST00000494123 ZCWPW1Q9H0M4 648 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 IGFLR1Q9H665 355 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 MTMR10Q9NXD2 777 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 HMGXB4Q9UGU5 601 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 DAAM1Q9Y4D1 1078 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 FHOD1Q9Y613 1164 aa15.53■□□□□ 0.08
BRCA1-223ENST00000494123 CDH23Q9H251 3354 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 FSD2A1L4K1 749 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 GLUD1P00367 558 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 USP8P40818 1118 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 POLR2FP61218 127 aaKnown RBP15.52■□□□□ 0.08
BRCA1-223ENST00000494123 ORC1Q13415 861 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 SLC39A12Q504Y0 691 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 TMEM270Q6UE05 265 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 ACOT1Q86TX2 421 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 GANQ9H2C0 597 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 DPEP3Q9H4B8 488 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 NME7Q9Y5B8 376 aa15.52■□□□□ 0.08
BRCA1-223ENST00000494123 PRRC2BQ5JSZ5 2229 aaKnown RBP15.52■□□□□ 0.07
BRCA1-223ENST00000494123 WDR27A2RRH5 827 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 ATP2C2O75185 946 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 PTPN1P18031 435 aaKnown RBP15.51■□□□□ 0.07
BRCA1-223ENST00000494123 CLCN4P51793 760 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 GPR17Q13304 367 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 MAPRE1Q15691 268 aaKnown RBP15.51■□□□□ 0.07
BRCA1-223ENST00000494123 NFE2Q16621 373 aaPredicted RBP15.51■□□□□ 0.07
BRCA1-223ENST00000494123 DUSP6Q16828 381 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 MDH1BQ5I0G3 518 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 TPGS2Q68CL5 300 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 DPY19L2P1Q6NXN4 242 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 LLGL2Q6P1M3 1020 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 CACNA2D4Q7Z3S7 1137 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 UBR7Q8N806 425 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 B3GALNT2Q8NCR0 500 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 ZNF461Q8TAF7 563 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 PGLYRP2Q96PD5 576 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 SPAG5Q96R06 1193 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 TWNKQ96RR1 684 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 NLRC4Q9NPP4 1024 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 GTF3C4Q9UKN8 822 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 PLXNA3P51805 1871 aa15.51■□□□□ 0.07
BRCA1-223ENST00000494123 MYBPHLA2RUH7 354 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 TGM5O43548 720 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 NOL4O94818 638 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SRGAP2BP0DMP2 458 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 ACO1P21399 889 aaKnown RBP15.5■□□□□ 0.07
BRCA1-223ENST00000494123 ELF1P32519 619 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 ADCY1Q08828 1119 aa15.5■□□□□ 0.07
BRCA1-223ENST00000494123 SMARCB1Q12824 385 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms