RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ZNF668Q96K58 619 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 RBM14Q96PK6 669 aaKnown RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 FNBP1Q96RU3 617 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 GDF15Q99988 308 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 FANCFQ9NPI8 374 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 INIPQ9NRY2 104 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 EVLQ9UI08 416 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 SRPRBQ9Y5M8 271 aaKnown RBP12.26□□□□□ -0.45
BRCA1-222ENST00000493919 CDY2AQ9Y6F7 541 aa12.26□□□□□ -0.45
BRCA1-222ENST00000493919 SPECC1L-ADORA2AF8WAN1 911 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 CSPG5O95196 566 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 CLTAP09496 248 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SFTPCP11686 197 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 CDC25BP30305 580 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 CSTF2P33240 577 aaKnown RBP eCLIP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 ME1P48163 572 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 COPAP53621 1224 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 EPHB4P54760 987 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 MBTPS1Q14703 1052 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 FAM209AQ5JX71 171 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 WDR45BQ5MNZ6 344 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 TMTC4Q5T4D3 741 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 KIAA0319LQ8IZA0 1049 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 CALML4Q96GE6 196 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 BRINP2Q9C0B6 783 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SERHL2Q9H4I8 314 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 ANKEF1Q9NU02 776 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 MOCS1Q9NZB8 636 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 LOXHD1Q8IVV2 1947 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 HAT1O14929 419 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 MAFO75444 373 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 EIF2S1P05198 315 aaKnown RBP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 RPLP2P05387 115 aaKnown RBP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SSBP05455 408 aaKnown RBP eCLIP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 GHRP10912 638 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 TXLNAP40222 546 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 RFC5P40937 340 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SERPINB8P50452 374 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 DNM2P50570 870 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 HSD17B7P56937 341 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 KARSQ15046 597 aaKnown RBP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 NDUFA5Q16718 116 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 IER5Q5VY09 327 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 ATL3Q6DD88 541 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 TUBA3EQ6PEY2 450 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 TRAF7Q6Q0C0 670 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 MAEAQ7L5Y9 396 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 KCNG4Q8TDN1 519 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
BRCA1-222ENST00000493919 SPATA17Q96L03 361 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 ZCWPW1Q9H0M4 648 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 NT5C3AQ9H0P0 336 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 IL23AQ9NPF7 189 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 ABCF3Q9NUQ8 709 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 AIPL1Q9NZN9 384 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 DNM3Q9UQ16 869 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 TRPV2Q9Y5S1 764 aa12.25□□□□□ -0.45
BRCA1-222ENST00000493919 PHLPP2Q6ZVD8 1323 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 IQANK1A0A1B0GTG1 560 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 NBNO60934 754 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 PPP6R2O75170 966 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 CHRNA1P02708 482 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 S100BP04271 92 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-222ENST00000493919 PORP16435 677 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-222ENST00000493919 MUTP22033 750 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 CES1P23141 567 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 RFC2P35250 354 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 KCNJ6P48051 423 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 PDE6CP51160 858 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 KPNA1P52294 538 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-222ENST00000493919 GRB10Q13322 594 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 CMPK2Q5EBM0 449 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 C9orf50Q5SZB4 431 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 KIAA1614Q5VZ46 1190 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 USP49Q70CQ1 688 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 RHPN2Q8IUC4 686 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 FAM186BQ8IYM0 893 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 FUKQ8N0W3 1084 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 TMEM143Q96AN5 459 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 PNMA5Q96PV4 448 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 OSMRQ99650 979 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 DHX33Q9H6R0 707 aaKnown RBP12.24□□□□□ -0.45
BRCA1-222ENST00000493919 PLEKHA5Q9HAU0 1116 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 NOP53Q9NZM5 478 aaKnown RBP12.24□□□□□ -0.45
BRCA1-222ENST00000493919 RIMKLBQ9ULI2 386 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 TET1Q8NFU7 2136 aa12.24□□□□□ -0.45
BRCA1-222ENST00000493919 LOC105371267A0A1B0GV96 52 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 ZBBXA8MT70 800 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 CASQ2O14958 399 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-222ENST00000493919 DGAT1O75907 488 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 KRT4P19013 534 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 PLCG1P19174 1290 aa12.23□□□□□ -0.45
BRCA1-222ENST00000493919 HSD17B2P37059 387 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms