RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CUL9Q8IWT3 2517 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 FAM86C2PA6NEL3 165 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 LRRIQ3A6PVS8 624 aaPredicted RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 GABRDO14764 452 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 PSMA7O14818 248 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 STX10O60499 249 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 N4BP1O75113 896 aaKnown RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MICAL2O94851 1124 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 CLSTN1O94985 981 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 FGF19O95750 216 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 C4BPAP04003 597 aaKnown RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 ASGR2P07307 311 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MYL4P12829 197 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 P4HA1P13674 534 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 GNL1P36915 607 aaPredicted RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MYL6P60660 151 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 DLG4P78352 724 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 ENPEPQ07075 957 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 SIGLEC14Q08ET2 396 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 NCOA4Q13772 614 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 VEPH1Q14D04 833 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MAPRE1Q15691 268 aaKnown RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 TAF12Q16514 161 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 SGSM1Q2NKQ1 1148 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 WDR72Q3MJ13 1102 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MGAT5BQ3V5L5 792 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 TDRD10Q5VZ19 366 aaKnown RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 ISM2Q6H9L7 571 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MTSS1LQ765P7 747 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 LRRTM3Q86VH5 581 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 FAM186BQ8IYM0 893 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 SLC44A3Q8N4M1 653 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 OR6B3Q8NGW1 331 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 ITFG1Q8TB96 612 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 FAM200AQ8TCP9 573 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 TAF4BQ92750 862 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 ERCC4Q92889 916 aaPredicted RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 FGF13Q92913 245 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 PBXIP1Q96AQ6 731 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 DHTKD1Q96HY7 919 aaPredicted RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 FAM84AQ96KN4 292 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 SEPT5Q99719 369 aaPredicted RBP7.48□□□□□ -1.21
TOP3A-207ENST00000493648 MKNK1Q9BUB5 465 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 GPR88Q9GZN0 384 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 ASAH2Q9NR71 780 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 GDE1Q9NZC3 331 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 CEP72Q9P209 647 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 GTF3C4Q9UKN8 822 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 CDH9Q9ULB4 789 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 L1RE1Q9UN81 338 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 YIPF1Q9Y548 306 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 PCDHB5Q9Y5E4 795 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 BDP1A6H8Y1 2624 aa7.48□□□□□ -1.21
TOP3A-207ENST00000493648 SPTBN5Q9NRC6 3674 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 TMEM221A6NGB7 291 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ANHXE9PGG2 379 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 M0R296 226 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 TACC1O75410 805 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 AKAP3O75969 853 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 VNN2O95498 520 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 PDGFRBP09619 1106 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 HAPLN1P10915 354 aaPredicted RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 EPB41P11171 864 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 WARSP23381 471 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ACAT1P24752 427 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 RPL10AP62906 217 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 FKBP3Q00688 224 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 LRRC63Q05C16 580 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF699Q32M78 642 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ZACNQ401N2 412 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ZCWPW2Q504Y3 356 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 INTS6LQ5JSJ4 861 aaKnown RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ANKRD40Q6AI12 368 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 C4orf50Q6ZRC1 276 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 LIMS2Q7Z4I7 341 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 BMP8AQ7Z5Y6 402 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 DNAJB7Q7Z6W7 309 aaPredicted RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 OSTM1Q86WC4 334 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 SPATA2LQ8IUW3 424 aaPredicted RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 HS6ST3Q8IZP7 471 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ADSSL1Q8N142 457 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 CCDC150Q8NCX0 1101 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 PLEKHO2Q8TD55 490 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 RSAD2Q8WXG1 361 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ING5Q8WYH8 240 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 PSMG2Q969U7 264 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 MCRS1Q96EZ8 462 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 SYT15Q9BQS2 421 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 IMPG2Q9BZV3 1241 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 GZF1Q9H116 711 aaPredicted RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 CRISPLD1Q9H336 500 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 VRTNQ9H8Y1 702 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ABCB6Q9NP58 842 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
TOP3A-207ENST00000493648 ABI2Q9NYB9 513 aaPredicted RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
TOP3A-207ENST00000493648 NXF1Q9UBU9 619 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms