RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
COL6A3-214ENST00000493608 SLC39A2Q9NP94 309 aa11.51□□□□□ -0.57
COL6A3-214ENST00000493608 CEP72Q9P209 647 aa11.51□□□□□ -0.57
COL6A3-214ENST00000493608 AGAP1Q9UPQ3 857 aa11.51□□□□□ -0.57
COL6A3-214ENST00000493608 TSC2P49815 1807 aa11.51□□□□□ -0.57
COL6A3-214ENST00000493608 KRBA1A5PL33 1030 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 KRT19P08727 400 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 POU2F2P09086 479 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 MYL4P12829 197 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 NPR3P17342 541 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 USP46P62068 366 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 GPC5P78333 572 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
COL6A3-214ENST00000493608 NHLH1Q02575 133 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 GPR17Q13304 367 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 SLC39A12Q504Y0 691 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 CNNM4Q6P4Q7 775 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 UNC13DQ70J99 1090 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 EPM2AIP1Q7L775 607 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-214ENST00000493608 METTL23Q86XA0 190 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 CEP57L1Q8IYX8 460 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 GPD1LQ8N335 351 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 CSGALNACT2Q8N6G5 542 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 OR10T2Q8NGX3 314 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 LEO1Q8WVC0 666 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-214ENST00000493608 NXPE3Q969Y0 559 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 SPATA32Q96LK8 384 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 RTP3Q9BQQ7 232 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 HSPBP1Q9NZL4 362 aa11.5□□□□□ -0.57
COL6A3-214ENST00000493608 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-214ENST00000493608 MTMR11A4FU01 709 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 TGFB1I1O43294 461 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 SRFP11831 508 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 PFKFB1P16118 471 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 MMP16P51512 607 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 CYP2J2P51589 502 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 KRT85P78386 507 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 EHHADHQ08426 723 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 TCF15Q12870 199 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 BFSP1Q12934 665 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 PRSS36Q5K4E3 855 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 CYP4A22Q5TCH4 519 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 CWF19L1Q69YN2 538 aaKnown RBP11.49□□□□□ -0.57
COL6A3-214ENST00000493608 IQCEQ6IPM2 695 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 CENPPQ6IPU0 288 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 MTSS1LQ765P7 747 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 PDZD4Q76G19 769 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-214ENST00000493608 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
COL6A3-214ENST00000493608 LRRTM3Q86VH5 581 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 NT5DC4Q86YG4 428 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 THEM5Q8N1Q8 247 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 ELMOD1Q8N336 334 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 OR5B17Q8NGF7 314 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 CACTINQ8WUQ7 758 aaKnown RBP11.49□□□□□ -0.57
COL6A3-214ENST00000493608 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 PAGE5Q96GU1 130 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 ZSWIM3Q96MP5 696 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 MTMR12Q9C0I1 747 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 KCNH6Q9H252 994 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 MAGEF1Q9HAY2 307 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 GDPD2Q9HCC8 539 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 YIPF1Q9Y548 306 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 ZFP37Q9Y6Q3 630 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-214ENST00000493608 PTPRJQ12913 1337 aa11.49□□□□□ -0.57
COL6A3-214ENST00000493608 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 H0Y858 1186 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 EIF3DO15371 548 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL6A3-214ENST00000493608 KLRC4O43908 158 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 MOSPD3O75425 235 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 CYP11A1P05108 521 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 TMEM191BP0C7N4 346 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 SLFN14P0C7P3 912 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 RFX1P22670 979 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 CMA1P23946 247 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 ALDH1A3P47895 512 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 EPHB3P54753 998 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 MYBPC2Q14324 1141 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 SV2CQ496J9 727 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 TANGO2Q6ICL3 276 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 CXorf38Q8TB03 319 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 ANKRD36BP1Q96IX9 119 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 SEPT5Q99719 369 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-214ENST00000493608 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-214ENST00000493608 ZCWPW1Q9H0M4 648 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 DNAJC25Q9H1X3 360 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 AGPAT3Q9NRZ7 376 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 FAM86C1Q9NVL1 165 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 INTS13Q9NVM9 706 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 WNT16Q9UBV4 365 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 SIX4Q9UIU6 781 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 DSEQ9UL01 958 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 MAFFQ9ULX9 164 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 COL4A3Q01955 1670 aa11.48□□□□□ -0.57
COL6A3-214ENST00000493608 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms