RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 HSFX1Q9UBD0 423 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 KCNG1Q9UIX4 513 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 USP24Q9UPU5 2620 aa14.83□□□□□ -0.04
SAMM50-204ENST00000493161 K7ENM7 598 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 XPOTO43592 962 aaKnown RBP14.82□□□□□ -0.04
SAMM50-204ENST00000493161 EPN2O95208 641 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 EGFP01133 1207 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 ZNF806P0C7X5 589 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 HAPLN1P10915 354 aaPredicted RBP14.82□□□□□ -0.04
SAMM50-204ENST00000493161 ARSAP15289 507 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 TUFMP49411 452 aaKnown RBP14.82□□□□□ -0.04
SAMM50-204ENST00000493161 GPR15P49685 360 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 ACOT2P49753 483 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 PLCB2Q00722 1185 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 TMEM132DQ14C87 1099 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 MCTP1Q6DN14 999 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 IL31Q6EBC2 164 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 GPBP1Q86WP2 473 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 CMTM8Q8IZV2 173 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 MYCT1Q8N699 235 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 MAB21L3Q8N8X9 362 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 KCNN1Q92952 543 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 USP13Q92995 863 aaPredicted RBP14.82□□□□□ -0.04
SAMM50-204ENST00000493161 FIZ1Q96SL8 496 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 TMLHEQ9NVH6 421 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 THG1LQ9NWX6 298 aaKnown RBP14.82□□□□□ -0.04
SAMM50-204ENST00000493161 KCND2Q9NZV8 630 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 RALYQ9UKM9 306 aaKnown RBP14.82□□□□□ -0.04
SAMM50-204ENST00000493161 SCN1AP35498 2009 aa14.82□□□□□ -0.04
SAMM50-204ENST00000493161 H0YCG3 227 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 CYB561D2O14569 222 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 F11P03951 625 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 HMGA1P17096 107 aaKnown RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 PMLP29590 882 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 CDC25CP30307 473 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 LIMK1P53667 647 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 RUNX3Q13761 415 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 VEPH1Q14D04 833 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 KYAT1Q16773 422 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 ZC2HC1CQ53FD0 456 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 STPG1Q5TH74 334 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 SDHAF4Q5VUM1 108 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 TXNDC8Q6A555 127 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 SCARA3Q6AZY7 606 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 TCEAL6Q6IPX3 200 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 CACNA2D4Q7Z3S7 1137 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 C12orf50Q8NA57 414 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 TCEAL3Q969E4 200 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 CDK5RAP3Q96JB5 506 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 PYM1Q9BRP8 204 aaKnown RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 SH2B1Q9NRF2 756 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 ABI2Q9NYB9 513 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 ODF2LQ9ULJ1 636 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-204ENST00000493161 GREB1Q4ZG55 1949 aa14.81□□□□□ -0.04
SAMM50-204ENST00000493161 EML5Q05BV3 1969 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 SDK1Q7Z5N4 2213 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 TRDMT1O14717 391 aaKnown RBP14.8□□□□□ -0.04
SAMM50-204ENST00000493161 FOXD2O60548 495 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-204ENST00000493161 RNF40O75150 1001 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 CCDC192P0DO97 292 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 GALK1P51570 392 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 ZNF131P52739 623 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 NLRP12P59046 1061 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 GRSF1Q12849 480 aaKnown RBP eCLIP14.8□□□□□ -0.04
SAMM50-204ENST00000493161 MCM6Q14566 821 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 TAF12Q16514 161 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 RILPL1Q5EBL4 403 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 PLA2G2CQ5R387 149 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 CD302Q8IX05 232 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 EZH1Q92800 747 aaPredicted RBP14.8□□□□□ -0.04
SAMM50-204ENST00000493161 LOXL4Q96JB6 756 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 GCNAQ96QF7 691 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 HHIPQ96QV1 700 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 TSPAN18Q96SJ8 248 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 DPP3Q9NY33 737 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 ANGPTL2Q9UKU9 493 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 SLC8A2Q9UPR5 921 aa14.8□□□□□ -0.04
SAMM50-204ENST00000493161 DCLK1O15075 740 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 TRAK2O60296 914 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 FAM13AO94988 1023 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 LAMA1P25391 3075 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 AVPR1AP37288 418 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 WNT7BP56706 349 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 METTL23Q86XA0 190 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 EFCAB13Q8IY85 973 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 KCTD17Q8N5Z5 321 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 DDX1Q92499 740 aaKnown RBP14.79□□□□□ -0.04
SAMM50-204ENST00000493161 ATG2BQ96BY7 2078 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 PI4K2AQ9BTU6 479 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 ZHX3Q9H4I2 956 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 PARVGQ9HBI0 331 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 TDP1Q9NUW8 608 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 DSEQ9UL01 958 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 DERAQ9Y315 318 aa14.79□□□□□ -0.04
SAMM50-204ENST00000493161 FRYQ5TBA9 3013 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 CCDC163A0A0D9SF12 145 aa14.78□□□□□ -0.04
SAMM50-204ENST00000493161 TADA3O75528 432 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms