RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
CSTF1-206ENST00000493039 LRRC53A6NM62 1247 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 CREB3O43889 395 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 TBC1D4O60343 1298 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 HUS1O60921 280 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 OAZ2O95190 189 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 TBXAS1P24557 533 aaPredicted RBP10□□□□□ -0.81
CSTF1-206ENST00000493039 MFAP3P55082 362 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 ERVK-21P61565 698 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 PLCB3Q01970 1234 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 WDR59Q6PJI9 974 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 ENOSF1Q7L5Y1 443 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 IRF2BP2Q7Z5L9 587 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 DDX53Q86TM3 631 aaKnown RBP10□□□□□ -0.81
CSTF1-206ENST00000493039 ADGRF2Q8IZF7 708 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 OLIG1Q8TAK6 271 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 SPPL3Q8TCT6 385 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 JAKMIP2Q96AA8 810 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 ALG13Q9NP73 1137 aaKnown RBP10□□□□□ -0.81
CSTF1-206ENST00000493039 PCDHB8Q9UN66 801 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 STXBP5LQ9Y2K9 1186 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 PCDHB12Q9Y5F1 795 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10□□□□□ -0.813e-7■■■□□ 14.7
CSTF1-206ENST00000493039 SF3B1O75533 1304 aaKnown RBP eCLIP10□□□□□ -0.81
CSTF1-206ENST00000493039 MYO7AQ13402 2215 aa10□□□□□ -0.81
CSTF1-206ENST00000493039 SPTBN5Q9NRC6 3674 aaKnown RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 EPOPA6NHQ4 379 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 CYP26A1O43174 497 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 SH3BP5O60239 455 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 LILRB3O75022 631 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 ATP2C2O75185 946 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 FAM163BP0C2L3 166 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TYMPP19971 482 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 RFX1P22670 979 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 WARSP23381 471 aaKnown RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 DNAJB2P25686 324 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 KRT9P35527 623 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 NDST1P52848 882 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 RAD23BP54727 409 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 ZBED6P86452 979 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 ZNF394Q53GI3 561 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 PDXDC1Q6P996 788 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TMEM270Q6UE05 265 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 SLC4A11Q8NBS3 891 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 OR10T2Q8NGX3 314 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 LNX1Q8TBB1 728 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TMEM209Q96SK2 561 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 DNAJC7Q99615 494 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 DPEP3Q9H4B8 488 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 CERS4Q9HA82 394 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 BARX2Q9UMQ3 279 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 LUC7L2Q9Y383 392 aaKnown RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 KIAA1671Q9BY89 1806 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 SYN3O14994 580 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TRAPPC3O43617 180 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 MFAP3LO75121 409 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 SOD2P04179 222 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 ODC1P11926 461 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 P4HA1P13674 534 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 ACAT1P24752 427 aaKnown RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 CTNNB1P35222 781 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 SOX5P35711 763 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 GNL1P36915 607 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 CDR1P51861 262 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 ERVFC1P60507 584 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 HGSNATQ68CP4 663 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 PRSS55Q6UWB4 352 aaPredicted RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 LRRTM3Q86VH5 581 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 CEP57Q86XR8 500 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 C12orf29Q8N999 325 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TFAP2BQ92481 460 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TMEM169Q96HH4 297 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TGS1Q96RS0 853 aaKnown RBP9.99□□□□□ -0.81
CSTF1-206ENST00000493039 PKMYT1Q99640 499 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 TTPALQ9BTX7 342 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 AAASQ9NRG9 546 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 AIPL1Q9NZN9 384 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 PCDHB4Q9Y5E5 795 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 GBF1Q92538 1859 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 VWA8A3KMH1 1905 aa9.99□□□□□ -0.81
CSTF1-206ENST00000493039 GRM6O15303 877 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 ADAM12O43184 909 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 GFPT2O94808 682 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 HNRNPH3P31942 346 aaKnown RBP9.98□□□□□ -0.81
CSTF1-206ENST00000493039 PPM1AP35813 382 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 CD151P48509 253 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
CSTF1-206ENST00000493039 USP41Q3LFD5 358 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 LRIT3Q3SXY7 679 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 OVOS1Q6IE37 1185 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
CSTF1-206ENST00000493039 SLC47A2Q86VL8 602 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 PPFIBP1Q86W92 1011 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 DRC7Q8IY82 874 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 VPS52Q8N1B4 723 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 CRYBG2Q8N1P7 616 aa9.98□□□□□ -0.81
CSTF1-206ENST00000493039 TMEM86AQ8N2M4 240 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms