RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TWF1Q12792 350 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 DUSP4Q13115 394 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 PTPN21Q16825 1174 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 ANKRD40Q6AI12 368 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 KBTBD7Q8WVZ9 684 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 TAF4BQ92750 862 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 ZNF512Q96ME7 567 aaPredicted RBP11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 MMS19Q96T76 1030 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 ABCB6Q9NP58 842 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 IGSF9Q9P2J2 1179 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 DNMT3BQ9UBC3 853 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 ASB3Q9Y575 518 aa11.42□□□□□ -0.58
CDC42SE1-206ENST00000492796 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 DOCK8Q8NF50 2099 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 TRIM49BA6NDI0 452 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 ZNF197O14709 1029 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 STX10O60499 249 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 N4BP1O75113 896 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 MICAL2O94851 1124 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CLSTN1O94985 981 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 VNN1O95497 513 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 TRIM49P0CI25 452 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 TRIM49CP0CI26 452 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 LAMP2P13473 410 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 BMP6P22004 513 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 PIK3CAP42336 1068 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 EPHB3P54753 998 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 EPHA5P54756 1037 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 MTMR3Q13615 1198 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 MAPRE1Q15691 268 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CAMK4Q16566 473 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 SGSM1Q2NKQ1 1148 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 ZNF667Q5HYK9 610 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 C1orf220Q5T0J3 134 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CYP4A22Q5TCH4 519 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 KRT39Q6A163 491 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 ISM2Q6H9L7 571 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 PDZD4Q76G19 769 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 SV2AQ7L0J3 742 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 ITIH5Q86UX2 942 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 LRRTM3Q86VH5 581 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 OSTM1Q86WC4 334 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 ATAD1Q8NBU5 361 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 NXPE3Q969Y0 559 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 FUBP3Q96I24 572 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 MYADMQ96S97 322 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 PKMYT1Q99640 499 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 SEPT5Q99719 369 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CORO1BQ9BR76 489 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CRISPLD1Q9H336 500 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CLSTN2Q9H4D0 955 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 EPHX3Q9H6B9 360 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 TMEM8AQ9HCN3 771 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 ASAH2Q9NR71 780 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 HCFC1R1Q9NWW0 138 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CEP72Q9P209 647 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CDH9Q9ULB4 789 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 CDH7Q9ULB5 785 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 MRPS23Q9Y3D9 190 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 PCDHB5Q9Y5E4 795 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 NOTCH4Q99466 2003 aa11.41□□□□□ -0.58
CDC42SE1-206ENST00000492796 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 BIN1O00499 593 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 ASS1P00966 412 aaKnown RBP11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 ACAT1P24752 427 aaKnown RBP11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 GCLMP48507 274 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 NTHL1P78549 312 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 ZXDAP98168 799 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 PPP3CAQ08209 521 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 PAK1Q13153 545 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 VEPH1Q14D04 833 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 MGAT5BQ3V5L5 792 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 CFAP221Q4G0U5 840 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 PRSS36Q5K4E3 855 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 KLHL10Q6JEL2 608 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 C4orf50Q6ZRC1 276 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 UBALD2Q8IYN6 164 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 CCDC150Q8NCX0 1101 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 NELFBQ8WX92 580 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 EDAQ92838 391 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 FGF13Q92913 245 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 PSMG2Q969U7 264 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 CEP63Q96MT8 703 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 SYT15Q9BQS2 421 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 DNAJC25Q9H1X3 360 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 METTL14Q9HCE5 456 aaKnown RBP11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 LMBRD1Q9NUN5 540 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 GDE1Q9NZC3 331 aa11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 NXF1Q9UBU9 619 aaKnown RBP11.4□□□□□ -0.58
CDC42SE1-206ENST00000492796 CTNND2Q9UQB3 1225 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms