RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 AVPR1AP37288 418 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 PXNP49023 591 aaPredicted RBP11.92□□□□□ -0.5
SND1-215ENST00000492772 GUCY2FP51841 1108 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 BFSP1Q12934 665 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 RUNX3Q13761 415 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 KARSQ15046 597 aaKnown RBP11.92□□□□□ -0.5
SND1-215ENST00000492772 ELF2Q15723 593 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 HYIQ5T013 277 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 FSTL4Q6MZW2 842 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 PKN3Q6P5Z2 889 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 METTL23Q86XA0 190 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 CMTM8Q8IZV2 173 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
SND1-215ENST00000492772 OR10T2Q8NGX3 314 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 SPPL2BQ8TCT7 592 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 CDK5RAP3Q96JB5 506 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 FAM83CQ9BQN1 747 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 LSM14BQ9BX40 385 aaKnown RBP11.92□□□□□ -0.5
SND1-215ENST00000492772 ZCWPW1Q9H0M4 648 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 RXFP3Q9NSD7 469 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 ODF2LQ9ULJ1 636 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 DERAQ9Y315 318 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 ZNF638Q14966 1978 aaKnown RBP11.92□□□□□ -0.5
SND1-215ENST00000492772 FRYQ5TBA9 3013 aa11.92□□□□□ -0.5
SND1-215ENST00000492772 SOBPA7XYQ1 873 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 RNF40O75150 1001 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 PIGRP01833 764 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 DRD1P21728 446 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 CDC25AP30304 524 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 HOXC13P31276 330 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 TOB1P50616 345 aaPredicted RBP11.91□□□□□ -0.5
SND1-215ENST00000492772 SLC12A3P55017 1021 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 TMEM132DQ14C87 1099 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 ZRSR1Q15695 479 aaKnown RBP11.91□□□□□ -0.5
SND1-215ENST00000492772 IL17AQ16552 155 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 RNF43Q68DV7 783 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 JADE1Q6IE81 842 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
SND1-215ENST00000492772 THEM5Q8N1Q8 247 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 MSTO1Q9BUK6 570 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 SLC46A2Q9BY10 475 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 SMG9Q9H0W8 520 aaKnown RBP11.91□□□□□ -0.5
SND1-215ENST00000492772 HPS4Q9NQG7 708 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 GKN1Q9NS71 199 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 LAMA1P25391 3075 aa11.91□□□□□ -0.5
SND1-215ENST00000492772 FAM208BQ5VWN6 2430 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 ANO9A1A5B4 782 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 K7ENM7 598 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 PIRO00625 290 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 RHOBTB1O94844 696 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 PROS1P07225 676 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 NFICP08651 508 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 PLA2G4BP0C869 781 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 ABCD1P33897 745 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.5
SND1-215ENST00000492772 PDGFRLQ15198 375 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 PLK5Q496M5 336 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 USP13Q92995 863 aaPredicted RBP11.9□□□□□ -0.5
SND1-215ENST00000492772 ACDQ96AP0 544 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 FAM212AQ96EL1 285 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 ZSCAN31Q96LW9 406 aaPredicted RBP11.9□□□□□ -0.5
SND1-215ENST00000492772 PNMA5Q96PV4 448 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 EDEM2Q9BV94 578 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 EBF3Q9H4W6 596 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
SND1-215ENST00000492772 SH2B1Q9NRF2 756 aaPredicted RBP11.9□□□□□ -0.5
SND1-215ENST00000492772 TDP1Q9NUW8 608 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 CPSF3Q9UKF6 684 aaKnown RBP11.9□□□□□ -0.5
SND1-215ENST00000492772 TBX20Q9UMR3 447 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
SND1-215ENST00000492772 SCN1AP35498 2009 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 A0A0B4J269 797 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 APBB3O95704 486 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 EGFP01133 1207 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 TAF6P49848 677 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 NLRP12P59046 1061 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 ATP2C1P98194 919 aaPredicted RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 TMEM119Q4V9L6 283 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 TRIM68Q6AZZ1 485 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 PSAPL1Q6NUJ1 521 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 SYT13Q7L8C5 426 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 C11orf74Q86VG3 221 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 MAB21L3Q8N8X9 362 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 MRPS31Q92665 395 aaKnown RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 HHIPQ96QV1 700 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 P2RY13Q9BPV8 354 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 PYM1Q9BRP8 204 aaKnown RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 CCSER1Q9C0I3 900 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 DUSP15Q9H1R2 295 aaPredicted RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 ASB7Q9H672 318 aa11.89□□□□□ -0.51
SND1-215ENST00000492772 ABI2Q9NYB9 513 aaPredicted RBP11.89□□□□□ -0.51
SND1-215ENST00000492772 CCL26Q9Y258 94 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms