RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TMEM114B3SHH9 223 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 IRS4O14654 1257 aaPredicted RBP10.18□□□□□ -0.78
VPS8-225ENST00000492449 C8BP07358 591 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 RSPH10BP0C881 870 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 RBP3P10745 1247 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 THRAP10827 490 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 POLR2EP19388 210 aaKnown RBP10.18□□□□□ -0.78
VPS8-225ENST00000492449 HMOX2P30519 316 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 MARCKSL1P49006 195 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS8-225ENST00000492449 SF3B3Q15393 1217 aaKnown RBP10.18□□□□□ -0.78
VPS8-225ENST00000492449 DYMQ7RTS9 669 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 TTC7BQ86TV6 843 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 CENPSQ8N2Z9 138 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 CLPTM1LQ96KA5 538 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 POP1Q99575 1024 aaKnown RBP10.18□□□□□ -0.78
VPS8-225ENST00000492449 THAP2Q9H0W7 228 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 DNAJC17Q9NVM6 304 aaKnown RBP10.18□□□□□ -0.78
VPS8-225ENST00000492449 KCNK4Q9NYG8 393 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 ASIC3Q9UHC3 531 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 GNPTGQ9UJJ9 305 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 DTNAQ9Y4J8 743 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 ROBO3Q96MS0 1386 aa10.18□□□□□ -0.78
VPS8-225ENST00000492449 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 TXNDC9O14530 226 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 SULT1C4O75897 302 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ESRRBO95718 433 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 INHBBP09529 407 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 FAM58BPP0C7Q3 252 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PABPC1P11940 636 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 SOX5P35711 763 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PSMC1P62191 440 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 OVGP1Q12889 678 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 HIC1Q14526 733 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 FAM26FQ5R3K3 315 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 TMEM214Q6NUQ4 689 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 PGM2L1Q6PCE3 622 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PRUNE1Q86TP1 453 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 LRRC49Q8IUZ0 686 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 RASGRP4Q8TDF6 673 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PYDC1Q8WXC3 89 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 DCUN1D1Q96GG9 259 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 CTRCQ99895 268 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 SLC2A11Q9BYW1 496 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PSTPIP2Q9H939 334 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 C6orf203Q9P0P8 240 aaPredicted RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 NFASCO94856 1347 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 BAZ2AQ9UIF9 1905 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 KLF11O14901 512 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 TOM1O60784 492 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 CAPNS1P04632 268 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 DHRS4L1P0CG22 281 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ATF2P15336 505 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 HSPA13P48723 471 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 EIF2B2P49770 351 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 NSUN2Q08J23 767 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS8-225ENST00000492449 UBE4AQ14139 1066 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 TRIP10Q15642 601 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 TPTE2Q6XPS3 522 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 DGKHQ86XP1 1220 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 GLYCTKQ8IVS8 523 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ZCCHC9Q8N567 271 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 GSTCDQ8NEC7 633 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ALKBH8Q96BT7 664 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 TRIM11Q96F44 468 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 OLFM1Q99784 485 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 CCDC106Q9BWC9 280 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ARPP21Q9UBL0 812 aaPredicted RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 DOLKQ9UPQ8 538 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 B3GNT3Q9Y2A9 372 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 MAD1L1Q9Y6D9 718 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 BAZ2BQ9UIF8 2168 aaKnown RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 CRTAMO95727 393 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 TECP42680 631 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 MAGEA4P43358 317 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 SPCS2Q15005 226 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PHKG1Q16816 387 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 LRRC36Q1X8D7 754 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ANKDD1AQ495B1 522 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
VPS8-225ENST00000492449 CLEC4GQ6UXB4 293 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 TICAM1Q8IUC6 712 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 C4orf33Q8N1A6 199 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 ABTB2Q8N961 1025 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 CATSPER1Q8NEC5 780 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 PLEKHA8Q96JA3 519 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 GCNAQ96QF7 691 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 VTA1Q9NP79 307 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 SOX13Q9UN79 622 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 SORCS3Q9UPU3 1222 aa10.17□□□□□ -0.78
VPS8-225ENST00000492449 SF3B1O75533 1304 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■■■■■ 149.1
VPS8-225ENST00000492449 SPATA31A1Q5TZJ5 1347 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 PFDN6O15212 129 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 PARNO95453 639 aaKnown RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 C6orf222P0C671 652 aaPredicted RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 ATP6V1B1P15313 513 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms