RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 KRT82Q9NSB4 513 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GOLGA6AQ9NYA3 693 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 GIT1Q9Y2X7 761 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CAPN7Q9Y6W3 813 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 KNL1Q8NG31 2342 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 QSER1Q2KHR3 1735 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TYW5A2RUC4 315 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 KCNK3O14649 394 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PER2O15055 1255 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CCDC130P13994 396 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 WEE1P30291 646 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ELAVL2Q12926 359 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PSMD6Q15008 389 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 RPS6KA1Q15418 735 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SLC10A6Q3KNW5 377 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TDRD10Q5VZ19 366 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 PRSS55Q6UWB4 352 aaPredicted RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TRIM59Q8IWR1 403 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 YAF2Q8IY57 180 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF710Q8N1W2 664 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 ATAD1Q8NBU5 361 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 MIPOL1Q8TD10 442 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TMC2Q8TDI7 906 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 HAUS1Q96CS2 278 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 FZD8Q9H461 694 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TLE6Q9H808 572 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SPG21Q9NZD8 308 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SLC12A6Q9UHW9 1150 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 AMFRQ9UKV5 643 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 TFR2Q9UP52 801 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 BZW2Q9Y6E2 419 aaKnown RBP4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CDY1Q9Y6F8 540 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 CNTNAP2Q9UHC6 1331 aa4.74□□□□□ -1.65
TRA2B-215ENST00000492417 SCN4AP35499 1836 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 RBM47A0AV96 593 aaKnown RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 LRRD1A4D1F6 860 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 H7C4K7 107 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CLDN5O00501 218 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ENPP3O14638 875 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ZBTB24O43167 697 aaPredicted RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SRGAP2O75044 1071 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 MOCS3O95396 460 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PLEKP08567 350 aaPredicted RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SRGAP2BP0DMP2 458 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ADSSP30520 456 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SDC4P31431 198 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CXCR5P32302 372 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 GRIK3Q13003 919 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 TARBP2Q15633 366 aaKnown RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 DCAF6Q58WW2 860 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 C10orf120Q5SQS8 335 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CEP85LQ5SZL2 805 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 LHX8Q68G74 356 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CNKSR3Q6P9H4 555 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 TOGARAM2Q6ZUX3 1019 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 KLHL7Q8IXQ5 586 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 C12orf29Q8N999 325 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CCNYQ8ND76 341 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SLC2A14Q8TDB8 520 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 WNT8BQ93098 351 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 FBXO32Q969P5 355 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 C18orf8Q96DM3 657 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CCDC51Q96ER9 411 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SLITRK1Q96PX8 696 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SPON2Q9BUD6 331 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 STK33Q9BYT3 514 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 KCTD10Q9H3F6 313 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ATXN3LQ9H3M9 355 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ABHD10Q9NUJ1 306 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 TBC1D13Q9NVG8 400 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SAMD15Q9P1V8 674 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ITGA11Q9UKX5 1188 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PHF24Q9UPV7 400 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 FNDC3AQ9Y2H6 1198 aaKnown RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 RRP15Q9Y3B9 282 aaKnown RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 A0A1B0GTH6 734 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PRPSAP2O60256 369 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SF3B1O75533 1304 aaKnown RBP eCLIP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 NDUFA10O95299 355 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 STAMBPO95630 424 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 NCAM1P13591 858 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 CAP1Q01518 475 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PTPN11Q06124 597 aaPredicted RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PSMD5Q16401 504 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 USP41Q3LFD5 358 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 PDXDC1Q6P996 788 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SLC47A2Q86VL8 602 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 HOOK3Q86VS8 718 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 UBL4BQ8N7F7 174 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 EDEM1Q92611 657 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 USP6NLQ92738 828 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 APBB2Q92870 758 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 EMID1Q96A84 441 aaPredicted RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 IQCDQ96DY2 449 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 ADGRA2Q96PE1 1338 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 GAS2L1Q99501 681 aaPredicted RBP4.73□□□□□ -1.65
TRA2B-215ENST00000492417 AGPAT1Q99943 283 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 BPIFA3Q9BQP9 254 aa4.73□□□□□ -1.65
TRA2B-215ENST00000492417 SPATS2LQ9NUQ6 558 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms