RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 PUM1Q14671 1186 aaKnown RBP eCLIP16.54■□□□□ 0.24
MRPL55-231ENST00000492170 DGLUCYQ7Z3D6 616 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 GPIHBP1Q8IV16 184 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 DCP1BQ8IZD4 617 aaKnown RBP16.54■□□□□ 0.24
MRPL55-231ENST00000492170 GPR161Q8N6U8 529 aaKnown RBP16.54■□□□□ 0.24
MRPL55-231ENST00000492170 DNAJC19Q96DA6 116 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 CLIC6Q96NY7 704 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 TASP1Q9H6P5 420 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 OLFML3Q9NRN5 406 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 ABI2Q9NYB9 513 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-231ENST00000492170 TBC1D7Q9P0N9 293 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 PCDHB13Q9Y5F0 798 aa16.54■□□□□ 0.24
MRPL55-231ENST00000492170 CACNA1AO00555 2505 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 HAPLN1P10915 354 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-231ENST00000492170 TDGF1P13385 188 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 IDEP14735 1019 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 SYT1P21579 422 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 WEE1P30291 646 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 STAT6P42226 847 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 CDR1P51861 262 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 TFAMQ00059 246 aaKnown RBP16.53■□□□□ 0.24
MRPL55-231ENST00000492170 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 TSPY1Q01534 308 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 KCNA1Q09470 495 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 RALGPS2Q86X27 583 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-231ENST00000492170 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 BPIFB1Q8TDL5 484 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 GIPC2Q8TF65 315 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 SAAL1Q96ER3 474 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 RBAKQ9NYW8 714 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-231ENST00000492170 ZMYM5Q9UJ78 669 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 GMEB2Q9UKD1 530 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 RAB23Q9ULC3 237 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 PCDHB5Q9Y5E4 795 aa16.53■□□□□ 0.24
MRPL55-231ENST00000492170 NUP210Q8TEM1 1887 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-231ENST00000492170 MYBPHLA2RUH7 354 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 PRAMEF12O95522 483 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.24
MRPL55-231ENST00000492170 GARTP22102 1010 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 POLR2BP30876 1174 aaKnown RBP16.52■□□□□ 0.24
MRPL55-231ENST00000492170 CTHP32929 405 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 CXCL12P48061 93 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 SOX9P48436 509 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 FAM173BQ6P4H8 233 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 LRRTM3Q86VH5 581 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 SPEM1Q8N4L4 309 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 CACTINQ8WUQ7 758 aaKnown RBP16.52■□□□□ 0.24
MRPL55-231ENST00000492170 ZFYVE19Q96K21 471 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 IL21Q9HBE4 155 aa16.52■□□□□ 0.24
MRPL55-231ENST00000492170 THG1LQ9NWX6 298 aaKnown RBP16.52■□□□□ 0.24
MRPL55-231ENST00000492170 MORC2Q9Y6X9 1032 aaPredicted RBP16.52■□□□□ 0.24
MRPL55-231ENST00000492170 CEP250Q9BV73 2442 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 TCHHQ07283 1943 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 HUS1O60921 280 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 ITGB3P05106 788 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 CASP5P51878 434 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 SATB1Q01826 763 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 NFE2Q16621 373 aaPredicted RBP16.51■□□□□ 0.23
MRPL55-231ENST00000492170 DGKKQ5KSL6 1271 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 CELF5Q8N6W0 485 aaKnown RBP16.51■□□□□ 0.23
MRPL55-231ENST00000492170 LRRC52Q8N7C0 313 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 C1orf127Q8N9H9 656 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 TTC8Q8TAM2 541 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 LRRC3BQ96PB8 259 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 TMEM206Q9H813 350 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 PANK4Q9NVE7 773 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 DLL3Q9NYJ7 618 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 GTSE1Q9NYZ3 720 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
MRPL55-231ENST00000492170 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 EXTL3O43909 919 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 DDX6P26196 483 aaKnown RBP eCLIP16.5■□□□□ 0.23
MRPL55-231ENST00000492170 WNT7BP56706 349 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 BFSP1Q12934 665 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 GAS6Q14393 721 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 SLC39A14Q15043 492 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 TXNDC11Q6PKC3 985 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 CMTM8Q8IZV2 173 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 TMEM86AQ8N2M4 240 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
MRPL55-231ENST00000492170 LEO1Q8WVC0 666 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-231ENST00000492170 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
MRPL55-231ENST00000492170 RBM12Q9NTZ6 932 aaKnown RBP16.5■□□□□ 0.23
MRPL55-231ENST00000492170 ITGA11Q9UKX5 1188 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 L1RE1Q9UN81 338 aa16.5■□□□□ 0.23
MRPL55-231ENST00000492170 DNAH14Q0VDD8 3507 aa16.49■□□□□ 0.23
MRPL55-231ENST00000492170 GOLGA8IPA6NC78 632 aa16.49■□□□□ 0.23
MRPL55-231ENST00000492170 GOLGA8JA6NMD2 632 aa16.49■□□□□ 0.23
MRPL55-231ENST00000492170 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
MRPL55-231ENST00000492170 PAPSS2O95340 614 aaPredicted RBP16.49■□□□□ 0.23
MRPL55-231ENST00000492170 TMEM191BP0C7N4 346 aa16.49■□□□□ 0.23
MRPL55-231ENST00000492170 CSH1P0DML2 217 aa16.49■□□□□ 0.23
MRPL55-231ENST00000492170 CSH2P0DML3 217 aa16.49■□□□□ 0.23
MRPL55-231ENST00000492170 SDHBP21912 280 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms