RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FRYLO94915 3013 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 HEPACAM2A8MVW5 462 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 SPTLC2O15270 562 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 SOAT2O75908 522 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 GCNT3O95395 438 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 CHRNB1P11230 501 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 HMGA1P17096 107 aaKnown RBP9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 RFX1P22670 979 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 GDI1P31150 447 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 GRM2Q14416 872 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 UBXN2BQ14CS0 331 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 SV2CQ496J9 727 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 SLC39A12Q504Y0 691 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 STXBP5Q5T5C0 1151 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 C1orf228Q6PIY5 440 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 ZC3H14Q6PJT7 736 aaKnown RBP9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 SHC4Q6S5L8 630 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 METTL23Q86XA0 190 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 THEM5Q8N1Q8 247 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 TMEM86AQ8N2M4 240 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 PDCL2Q8N4E4 241 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 TOP6BLQ8N6T0 577 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 ZNF507Q8TCN5 953 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 SPPL2BQ8TCT7 592 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 CACTINQ8WUQ7 758 aaKnown RBP9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 TMEM174Q8WUU8 243 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 MSANTD3Q96H12 275 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 C7orf25Q9BPX7 421 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 PYM1Q9BRP8 204 aaKnown RBP9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 FAM126AQ9BYI3 521 aaPredicted RBP9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 TRIM9Q9C026 710 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 TASP1Q9H6P5 420 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 TMLHEQ9NVH6 421 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 ZSCAN32Q9NX65 697 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 ITGA11Q9UKX5 1188 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 PCDHGA2Q9Y5H1 932 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 R4GN57 208 aa9.03□□□□□ -0.96
SMARCB1-207ENST00000491967 MYBPHLA2RUH7 354 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 ZNF263O14978 683 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 EIF3DO15371 548 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 TGFB1I1O43294 461 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 LAMTOR5O43504 91 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 CUTAO60888 179 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 PRPF6O94906 941 aaKnown RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 PAPSS2O95340 614 aaPredicted RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 F11P03951 625 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM163BP0C2L3 166 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 IDEP14735 1019 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 GABRR2P28476 465 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 SNRPFP62306 86 aaKnown RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 MTAPQ13126 283 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 NFE2Q16621 373 aaPredicted RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 SOWAHAQ2M3V2 549 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 WDR44Q5JSH3 913 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 ATL3Q6DD88 541 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM171BQ6P995 826 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 DPH6Q7L8W6 267 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 DCP1BQ8IZD4 617 aaKnown RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 GPD1LQ8N335 351 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 GLIS3Q8NEA6 775 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM3CQ92520 227 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 SAAL1Q96ER3 474 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 ZNF560Q96MR9 790 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 ZNF396Q96N95 335 aaPredicted RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 SLC46A2Q9BY10 475 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 SPATA6Q9NWH7 488 aaPredicted RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 RBAKQ9NYW8 714 aaPredicted RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 TFIP11Q9UBB9 837 aaKnown RBP9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 L1RE1Q9UN81 338 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 AGAP1Q9UPQ3 857 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 PIAS3Q9Y6X2 628 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
SMARCB1-207ENST00000491967 NOL4O94818 638 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 PRAMEF12O95522 483 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 ITGB3P05106 788 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 DDX6P26196 483 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 CDC25CP30307 473 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 HOXA6P31267 233 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 LHX1P48742 406 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 NLRP12P59046 1061 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 RBP5P82980 135 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 TFAMQ00059 246 aaKnown RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 FOXK2Q01167 660 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 AMPD3Q01432 767 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 GAS6Q14393 721 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 STK38Q15208 465 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 BMT2Q1RMZ1 405 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 CFAP221Q4G0U5 840 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 ARHGAP29Q52LW3 1261 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 INTS6LQ5JSJ4 861 aaKnown RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 GPR158Q5T848 1215 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 OSTM1Q86WC4 334 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 RALGPS2Q86X27 583 aaPredicted RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 C12orf56Q8IXR9 622 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms