RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 L1RE1Q9UN81 338 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 AGAP1Q9UPQ3 857 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 F5P12259 2224 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 COL4A2P08572 1712 aa13.67□□□□□ -0.22
SEC61A1-206ENST00000491668 HCRTO43612 131 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 KLRC4O43908 158 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 SMC2O95347 1197 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 DCNP07585 359 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 VIPR2P41587 438 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 CAMK4Q16566 473 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 CCDC142Q17RM4 750 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 SV2CQ496J9 727 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 SLC44A4Q53GD3 710 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 IQCEQ6IPM2 695 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 VITQ6UXI7 678 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 DNAJB7Q7Z6W7 309 aaPredicted RBP13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 NOC3LQ8WTT2 800 aaKnown RBP13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 SMARCD2Q92925 531 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 PSMG2Q969U7 264 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 PKMYT1Q99640 499 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 TRPV4Q9HBA0 871 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 EXOC1Q9NV70 894 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 CACNA1IQ9P0X4 2223 aa13.66□□□□□ -0.22
SEC61A1-206ENST00000491668 GVINP1Q7Z2Y8 2422 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 A0A1W2PRU2 124 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 CD72P21854 359 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 EPHB3P54753 998 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 PLD1Q13393 1074 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 PNOCQ13519 176 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 GRM2Q14416 872 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 MLF2Q15773 248 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 BMT2Q1RMZ1 405 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 OSTM1Q86WC4 334 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 NELFCDQ8IXH7 590 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 ZNF687Q8N1G0 1237 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 LRRC52Q8N7C0 313 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 LEMD2Q8NC56 503 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 PJA1Q8NG27 643 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 SMARCE1Q969G3 411 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 LRRC3BQ96PB8 259 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 NUP62CLQ9H1M0 184 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 IL21Q9HBE4 155 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 ZFP14Q9HCL3 533 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 SLC39A2Q9NP94 309 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 ITGA11Q9UKX5 1188 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 SIT1Q9Y3P8 196 aa13.65□□□□□ -0.22
SEC61A1-206ENST00000491668 SPTBN4Q9H254 2564 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 PVALEFA0A1B0GWK0 134 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 ZNF233A6NK53 670 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 PROB1E7EW31 1015 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 ARNTLO00327 626 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 STK25O00506 426 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 CLIC2O15247 247 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 ACAT1P24752 427 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 PNPLA4P41247 253 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 NBL1P41271 181 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 ALDH1A3P47895 512 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 RBP5P82980 135 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 BFSP1Q12934 665 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 ANGPT1Q15389 498 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 NFKBIBQ15653 356 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 SOWAHAQ2M3V2 549 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 SKOR2Q2VWA4 1001 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 STXBP4Q6ZWJ1 553 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 METTL23Q86XA0 190 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 THEM5Q8N1Q8 247 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 CLSTN2Q9H4D0 955 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 HEBP1Q9NRV9 189 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 ASB3Q9Y575 518 aa13.64□□□□□ -0.23
SEC61A1-206ENST00000491668 KANSL1LA0AUZ9 987 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 GABRDO14764 452 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 RPN1P04843 607 aaKnown RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 KRT19P08727 400 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 GPR15P49685 360 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 PFKPQ01813 784 aa13.63□□□□□ -0.23
SEC61A1-206ENST00000491668 PRKCQQ04759 706 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms