RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NASPP49321 788 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-211ENST00000491581 TAF6P49848 677 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 NUBP1P53384 320 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 PSMC1P62191 440 aaKnown RBP9.61□□□□□ -0.87
HDAC3-211ENST00000491581 DDR2Q16832 855 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 BRSK2Q8IWQ3 736 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 NELFCDQ8IXH7 590 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 SYCP3Q8IZU3 236 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 ELMOD1Q8N336 334 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 PDCL2Q8N4E4 241 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 SLC22A12Q96S37 553 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 SLC46A2Q9BY10 475 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 GTF3C4Q9UKN8 822 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 MAGED2Q9UNF1 606 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-211ENST00000491581 PIAS3Q9Y6X2 628 aa9.61□□□□□ -0.87
HDAC3-211ENST00000491581 MYBPHLA2RUH7 354 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 OR6C75A6NL08 312 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 ZNF197O14709 1029 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 ZNF263O14978 683 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 SPTLC2O15270 562 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 TGFB1I1O43294 461 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 SLC26A4O43511 780 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 HAPLN1P10915 354 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-211ENST00000491581 HMGA1P17096 107 aaKnown RBP9.6□□□□□ -0.87
HDAC3-211ENST00000491581 AFMP43652 599 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 ALDH1A3P47895 512 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 CASP4P49662 377 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 EPHB3P54753 998 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 SATB1Q01826 763 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 PRKCQQ04759 706 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 TXNDC8Q6A555 127 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 ARMCX5Q6P1M9 558 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 CSGALNACT2Q8N6G5 542 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 MAB21L3Q8N8X9 362 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 SUMF1Q8NBK3 374 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 PLEKHO2Q8TD55 490 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 FAM3CQ92520 227 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 PSMG2Q969U7 264 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 CLDN23Q96B33 292 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 RMDN1Q96DB5 314 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 CYP2S1Q96SQ9 504 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 PKMYT1Q99640 499 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 BCO2Q9BYV7 579 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-211ENST00000491581 ASB7Q9H672 318 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 LMAN1LQ9HAT1 526 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 FBRSL1Q9HCM7 1045 aaKnown RBP9.6□□□□□ -0.87
HDAC3-211ENST00000491581 DDX43Q9NXZ2 648 aaKnown RBP9.6□□□□□ -0.87
HDAC3-211ENST00000491581 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 SNX9Q9Y5X1 595 aa9.6□□□□□ -0.87
HDAC3-211ENST00000491581 LAMTOR5O43504 91 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 XPOTO43592 962 aaKnown RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 CST3P01034 146 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 LMNAP02545 664 aaKnown RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 CHRNB1P11230 501 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 TDGF1P13385 188 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 ARSAP15289 507 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 GAP43P17677 238 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 PDCP20941 246 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 PXNP49023 591 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 CYP2J2P51589 502 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 PFKPQ01813 784 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 DNM1Q05193 864 aaKnown RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 CUL4BQ13620 913 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 MYBPC2Q14324 1141 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 PON2Q15165 354 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 SOWAHAQ2M3V2 549 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 HEATR6Q6AI08 1181 aaKnown RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 SLFN12LQ6IEE8 588 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 ZNF852Q6ZMS4 543 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 CCDC73Q6ZRK6 1079 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 MFSD6LQ8IWD5 586 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 KBTBD7Q8WVZ9 684 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 INTS4Q96HW7 963 aaKnown RBP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 SHDQ96IW2 340 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 TRIM9Q9C026 710 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 IRF2BPLQ9H1B7 796 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC3-211ENST00000491581 OLFML3Q9NRN5 406 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 TMEM30AQ9NV96 361 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 PCDHA7Q9UN72 937 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 DERAQ9Y315 318 aa9.59□□□□□ -0.87
HDAC3-211ENST00000491581 FRYLO94915 3013 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 POLR2DO15514 142 aaKnown RBP9.58□□□□□ -0.88
HDAC3-211ENST00000491581 EXTL3O43909 919 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
HDAC3-211ENST00000491581 F11P03951 625 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 PDGFRBP09619 1106 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 TXLNAP40222 546 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 RAP1GAPP47736 663 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 KPNA1P52294 538 aaPredicted RBP9.58□□□□□ -0.88
HDAC3-211ENST00000491581 NLRP12P59046 1061 aa9.58□□□□□ -0.88
HDAC3-211ENST00000491581 USP46P62068 366 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms