RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, human

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB1-208	ENST00000491360	GOLGA6L10	A0A0M3HER8	536 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360		A0A1B0GTL3	188 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SH3D21	A4FU49	640 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360		F8VZ95	297 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360		F8W031	263 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	STXBP3	O00186	592 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	KCNK3	O14649	394 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	LIN7A	O14910	233 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	ADAMTS3	O15072	1205 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	CEP104	O60308	925 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	NOBOX	O60393	691 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	PPFIA2	O75334	1257 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	STARD3NL	O95772	234 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	GNA14	O95837	355 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	GNA15	P30679	374 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	DNA2	P51530	1060 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	GJA9	P57773	515 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	RNASE9	P60153	205 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	MAGOH	P61326	146 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SARNP	P82979	210 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	ZNF200	P98182	395 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	KLHL30	Q0D2K2	578 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	RAPGEF1	Q13905	1077 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	GRM4	Q14833	912 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	NONO	Q15233	471 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	TRADD	Q15628	312 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	HLF	Q16534	295 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	PPP2R5E	Q16537	467 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	INF2	Q27J81	1249 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	KIAA0753	Q2KHM9	967 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	FAM83B	Q5T0W9	1011 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	LRRC55	Q6ZSA7	311 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	TMC3	Q7Z5M5	1100 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	DNAJC10	Q8IXB1	793 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	ADGRG2	Q8IZP9	1017 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SYCE1	Q8N0S2	351 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	RASGEF1C	Q8N431	466 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	TTC9B	Q8N6N2	239 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	OR2W6P	Q8NHA6	318 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	RASGRP4	Q8TDF6	673 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	LRRC15	Q8TF66	581 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	LMBR1	Q8WVP7	490 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	TBC1D5	Q92609	795 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	MAGOHB	Q96A72	148 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SAMD11	Q96NU1	681 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SPAG5	Q96R06	1193 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	RIOK1	Q9BRS2	568 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	RAB17	Q9H0T7	212 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	NEUROG2	Q9H2A3	272 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SLC39A2	Q9NP94	309 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	NLRC4	Q9NPP4	1024 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	TMOD3	Q9NYL9	352 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	AIPL1	Q9NZN9	384 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SAMD15	Q9P1V8	674 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	PACSIN2	Q9UNF0	486 aa	Predicted RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SLC12A4	Q9UP95	1085 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	C15orf41	Q9Y2V0	281 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	UTP11	Q9Y3A2	253 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	NOC2L	Q9Y3T9	749 aa	Known RBP	5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	COL4A3BP	Q9Y5P4	624 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	AFF2	P51816	1311 aa		5.19	□□□□□ -1.58
ABCB1-208	ENST00000491360	SBF2	Q86WG5	1849 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	NHS	Q6T4R5	1651 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	DOT1L	Q8TEK3	1739 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	CYP2D7	A0A087X1C5	515 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360		A0A0A6YYK5	440 aa	Predicted RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	FRMD3	A2A2Y4	597 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	MYMK	A6NI61	221 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	TSPY2	A6NKD2	308 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	CCDC169	A6NNP5	214 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	ERVV-1	B6SEH8	477 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	KRIT1	O00522	736 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	RGS13	O14921	159 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	DAPK3	O43293	454 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	TLR2	O60603	784 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	CTNND1	O60716	968 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	NOL4	O94818	638 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	MME	P08473	750 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	RPSA	P08865	295 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	ALAD	P13716	330 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	NQO1	P15559	274 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	CHN1	P15882	459 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	GCK	P35557	465 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	IGHMBP2	P38935	993 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	EPS15	P42566	896 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	ZNF131	P52739	623 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	POLR2F	P61218	127 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	DYNLL1	P63167	89 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	FKBP3	Q00688	224 aa	Known RBP	5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	LMNB2	Q03252	620 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	MYO1E	Q12965	1108 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	GRB10	Q13322	594 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	SEPT2	Q15019	361 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	CHRNA2	Q15822	529 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	CLUL1	Q15846	466 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	TXNRD1	Q16881	649 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	TMEM266	Q2M3C6	531 aa		5.18	□□□□□ -1.58
ABCB1-208	ENST00000491360	SBK1	Q52WX2	424 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms