RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NR1D1P20393 614 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 PTPROQ16827 1216 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 GJB7Q6PEY0 223 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 C16orf59Q7L2K0 433 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 MAATS1Q7Z4T9 603 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 APBB2Q92870 758 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 ELMO3Q96BJ8 720 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 RNPC3Q96LT9 517 aaKnown RBP24.22■■□□□ 1.47
USF3-203ENST00000491165 AP1M1Q9BXS5 423 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 MTMR12Q9C0I1 747 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 ZMYND8Q9ULU4 1186 aaPredicted RBP24.22■■□□□ 1.47
USF3-203ENST00000491165 STXBP5LQ9Y2K9 1186 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 SART1O43290 800 aaKnown RBP24.22■■□□□ 1.47
USF3-203ENST00000491165 EVI5O60447 810 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 GFPT2O94808 682 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 ECHS1P30084 290 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 MLH1P40692 756 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 LRIG3Q6UXM1 1119 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 SV2AQ7L0J3 742 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 APBB1IPQ7Z5R6 666 aaPredicted RBP24.22■■□□□ 1.47
USF3-203ENST00000491165 TADA2BQ86TJ2 420 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 CGRRF1Q99675 332 aa24.22■■□□□ 1.47
USF3-203ENST00000491165 PTPRSQ13332 1948 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 KRIT1O00522 736 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 NDUFAB1O14561 156 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 FAM189BP81408 668 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 TDRD10Q5VZ19 366 aaKnown RBP24.21■■□□□ 1.47
USF3-203ENST00000491165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.21■■□□□ 1.47
USF3-203ENST00000491165 C15orf39Q6ZRI6 1047 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 DAAM2Q86T65 1068 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 CRIPAKQ8N1N5 446 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 RASGEF1CQ8N431 466 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 LRRC45Q96CN5 670 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 MIOSQ9NXC5 875 aa24.21■■□□□ 1.47
USF3-203ENST00000491165 GOLGA6L10A6NI86 522 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 PTGESO14684 152 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 ITGA4P13612 1032 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 RAB27AP51159 221 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 KYAT1Q16773 422 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 CEP85LQ5SZL2 805 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 TMEM199Q8N511 208 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 GAD1Q99259 594 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 CNTN3Q9P232 1028 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 PRKAG2Q9UGJ0 569 aa24.2■■□□□ 1.47
USF3-203ENST00000491165 TDRD15B5MCY1 1934 aaKnown RBP24.2■■□□□ 1.46
USF3-203ENST00000491165 BHMG1C9JSJ3 638 aaPredicted RBP24.2■■□□□ 1.46
USF3-203ENST00000491165 CPP00450 1065 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 C4BPAP04003 597 aaKnown RBP24.2■■□□□ 1.46
USF3-203ENST00000491165 RFC2P35250 354 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 XKR4Q5GH76 650 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 CNKSR3Q6P9H4 555 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 NT5DC3Q86UY8 548 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 WDR49Q8IV35 697 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 HTATIP2Q9BUP3 242 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 DDX47Q9H0S4 455 aaKnown RBP24.2■■□□□ 1.46
USF3-203ENST00000491165 ASB7Q9H672 318 aa24.2■■□□□ 1.46
USF3-203ENST00000491165 IL18RAPO95256 599 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 LSP1P33241 339 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 SOX5P35711 763 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 YARSP54577 528 aaKnown RBP24.19■■□□□ 1.46
USF3-203ENST00000491165 TFAMQ00059 246 aaKnown RBP24.19■■□□□ 1.46
USF3-203ENST00000491165 POU5F1Q01860 360 aaKnown RBP24.19■■□□□ 1.46
USF3-203ENST00000491165 B4GALNT4Q76KP1 1039 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 PACS2Q86VP3 889 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 SMIM28A0A1B0GU29 152 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 ARL5CA6NH57 179 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 F8VZ95 297 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 FGFR1P11362 822 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 HSD17B3P37058 310 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 MXI1P50539 228 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 GALCP54803 685 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 ENPEPQ07075 957 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 ZACNQ401N2 412 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 LNX1Q8TBB1 728 aaPredicted RBP24.19■■□□□ 1.46
USF3-203ENST00000491165 TAS1R2Q8TE23 839 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 DPF3Q92784 378 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 SEMA4DQ92854 862 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 C18orf25Q96B23 403 aaPredicted RBP24.19■■□□□ 1.46
USF3-203ENST00000491165 HES6Q96HZ4 224 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 SLITRK6Q9H5Y7 841 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 TMBIM4Q9HC24 238 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 TMEM8AQ9HCN3 771 aa24.19■■□□□ 1.46
USF3-203ENST00000491165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.19■■□□□ 1.462e-9■■■■■ 223.6
USF3-203ENST00000491165 VNN1O95497 513 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 GUCY1A3Q02108 690 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 TMCO2Q7Z6W1 182 aaPredicted RBP24.18■■□□□ 1.46
USF3-203ENST00000491165 SLC30A5Q8TAD4 765 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 LMO3Q8TAP4 145 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 KIF12Q96FN5 646 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 STK33Q9BYT3 514 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 EPN3Q9H201 632 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 PLEKHA5Q9HAU0 1116 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 AMFRQ9UKV5 643 aa24.18■■□□□ 1.46
USF3-203ENST00000491165 NCANO14594 1321 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 CST3P01034 146 aaPredicted RBP24.17■■□□□ 1.46
USF3-203ENST00000491165 SCN1AP35498 2009 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 MYL7Q01449 175 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 SOX4Q06945 474 aaPredicted RBP24.17■■□□□ 1.46
USF3-203ENST00000491165 ZBTB6Q15916 424 aa24.17■■□□□ 1.46
USF3-203ENST00000491165 CLLU1OSQ5K130 101 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms