RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 LACTBL1A8MY62 500 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 PATE3B3GLJ2 98 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 CLDN3O15551 220 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 ATG13O75143 517 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 CAVIN2O95810 425 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 TYMPP19971 482 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 CDC25CP30307 473 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 ENOX2Q16206 610 aaKnown RBP16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 CMTM8Q8IZV2 173 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 MAB21L3Q8N8X9 362 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 EZH1Q92800 747 aaPredicted RBP16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 SENP8Q96LD8 212 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 TPSD1Q9BZJ3 242 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 DNM3Q9UQ16 869 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 EML5Q05BV3 1969 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 NBEAQ8NFP9 2946 aa16.62■□□□□ 0.25
SCAMP3-208ENST00000490999 TRDMT1O14717 391 aaKnown RBP16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 NFICP08651 508 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 CLTAP09496 248 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 AVPR1AP37288 418 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 GPR15P49685 360 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 BFSP1Q12934 665 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 ORC2Q13416 577 aaPredicted RBP16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 ZBTB6Q15916 424 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 TAF12Q16514 161 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 ZPBP2Q6X784 338 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 TMEM150AQ86TG1 271 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 IGSF22Q8N9C0 903 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 KDF1Q8NAX2 398 aaPredicted RBP16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 DMXL2Q8TDJ6 3036 aa16.61■□□□□ 0.25
SCAMP3-208ENST00000490999 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 APBB3O95704 486 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 PLS3P13797 630 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 CYP3A5P20815 502 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 WEE1P30291 646 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 GALK1P51570 392 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 LILRA4P59901 499 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 PSMD2Q13200 908 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 DMC1Q14565 340 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 ACAP1Q15027 740 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 PTPAQ15257 358 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 DAB2IPQ5VWQ8 1189 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 TXNDC8Q6A555 127 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 CAMKK1Q8N5S9 505 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 SPIRE2Q8WWL2 714 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 ZCCHC14Q8WYQ9 949 aaKnown RBP16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 P2RY13Q9BPV8 354 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 ZCWPW1Q9H0M4 648 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 PLEKHA5Q9HAU0 1116 aa16.6■□□□□ 0.25
SCAMP3-208ENST00000490999 ANTXRLA6NF34 631 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 FAM189A1O60320 539 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 RHOBTB1O94844 696 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 BCKDHBP21953 392 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 DGKEP52429 567 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 IL17AQ16552 155 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 UAP1L1Q3KQV9 507 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 SDHAF4Q5VUM1 108 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 C9orf57Q5W0N0 161 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 KRT79Q5XKE5 535 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 DEFB124Q8NES8 71 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 GATA6Q92908 595 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 PLIN2Q99541 437 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 MMTAG2Q9BU76 263 aaKnown RBP16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 SCNM1Q9BWG6 230 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 C17orf75Q9HAS0 396 aa16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 MAGED2Q9UNF1 606 aaPredicted RBP16.59■□□□□ 0.25
SCAMP3-208ENST00000490999 LOC400499M0QZD8 3231 aa16.58■□□□□ 0.25
SCAMP3-208ENST00000490999 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 HNRNPDLO14979 420 aaKnown RBP16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 DRD1P21728 446 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 GUCY2CP25092 1073 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 GJA4P35212 333 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 TUFMP49411 452 aaKnown RBP16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 LIG4P49917 911 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 NLRP12P59046 1061 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 SPATA1Q5VX52 437 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 CC2D1AQ6P1N0 951 aaPredicted RBP16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 SYT13Q7L8C5 426 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 LRRTM3Q86VH5 581 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 TSTD1Q8NFU3 115 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 TMEM9BQ9NQ34 198 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 TDP1Q9NUW8 608 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 PCDHB6Q9Y5E3 794 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 WNT6Q9Y6F9 365 aa16.58■□□□□ 0.24
SCAMP3-208ENST00000490999 XPOTO43592 962 aaKnown RBP16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 TADA3O75528 432 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 HMGA1P17096 107 aaKnown RBP16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 SMTNP53814 917 aa16.57■□□□□ 0.24
SCAMP3-208ENST00000490999 SEC13P55735 322 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms