RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SMC1AQ14683 1233 aaKnown RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 STILQ15468 1287 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 PSMD5Q16401 504 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 PTPROQ16827 1216 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 TDRD12Q587J7 1177 aaKnown RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 VARS2Q5ST30 1063 aaKnown RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 ELMSAN1Q6PJG2 1045 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 TMC7Q7Z402 723 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 GPR65Q8IYL9 337 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 MICAL1Q8TDZ2 1067 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 RIN2Q8WYP3 895 aaPredicted RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 SYN2Q92777 582 aaPredicted RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 TMEM176AQ96HP8 235 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 HEXIM2Q96MH2 286 aaKnown RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 ARID3AQ99856 593 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 MRPL45Q9BRJ2 306 aaKnown RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 C17orf80Q9BSJ5 609 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 EMILIN2Q9BXX0 1053 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 GPR62Q9BZJ7 368 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 LMAN2LQ9H0V9 348 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 DEF6Q9H4E7 631 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 NGRNQ9NPE2 291 aaKnown RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 TLR9Q9NR96 1032 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 CDH9Q9ULB4 789 aa11.67□□□□□ -0.54
VARS2-210ENST00000490699 TIMM13Q9Y5L4 95 aaPredicted RBP11.67□□□□□ -0.54
VARS2-210ENST00000490699 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 C2CD2LO14523 706 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 THAP12O43422 761 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 CILPO75339 1184 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
VARS2-210ENST00000490699 GNA15P30679 374 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 PBX2P40425 430 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 CDH8P55286 799 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 APBA1Q02410 837 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 DSG1Q02413 1049 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 KLHL30Q0D2K2 578 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 SMARCB1Q12824 385 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 NFE2Q16621 373 aaPredicted RBP11.66□□□□□ -0.54
VARS2-210ENST00000490699 LRIT3Q3SXY7 679 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 ZNF394Q53GI3 561 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 SGO2Q562F6 1265 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 TMEM173Q86WV6 379 aaPredicted RBP11.66□□□□□ -0.54
VARS2-210ENST00000490699 FAM71AQ8IYT1 594 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 TMEM130Q8N3G9 435 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 ARNTL2Q8WYA1 636 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 PIK3R5Q8WYR1 880 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 KAT5Q92993 513 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 ELMO3Q96BJ8 720 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 KREMEN1Q96MU8 473 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 TCF25Q9BQ70 676 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 SYT15Q9BQS2 421 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 ACBD6Q9BR61 282 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 MED10Q9BTT4 135 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
VARS2-210ENST00000490699 TTYH3Q9C0H2 523 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 HESX1Q9UBX0 185 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 YBX2Q9Y2T7 364 aaKnown RBP11.66□□□□□ -0.54
VARS2-210ENST00000490699 PDE4DIPQ5VU43 2346 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 CEP290O15078 2479 aa11.66□□□□□ -0.54
VARS2-210ENST00000490699 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 F8W810 466 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 FOXN3O00409 490 aaPredicted RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 GABRDO14764 452 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 EPHB6O15197 1021 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 CYP26A1O43174 497 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 OAZ2O95190 189 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 PDGFRBP09619 1106 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 CTSAP10619 480 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 VDRP11473 427 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 ARPP19P56211 112 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 JAM2P57087 298 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 ZNF677Q86XU0 584 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 SPATA2LQ8IUW3 424 aaPredicted RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 B3GALNT2Q8NCR0 500 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 MSANTD4Q8NCY6 345 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 CCDC112Q8NEF3 446 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 BCL7CQ8WUZ0 217 aaPredicted RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 POF1BQ8WVV4 589 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 KBTBD7Q8WVZ9 684 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 BAP1Q92560 729 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 PANX2Q96RD6 677 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 ALG13Q9NP73 1137 aaKnown RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 LUC7LQ9NQ29 371 aaKnown RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 ABHD10Q9NUJ1 306 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.54
VARS2-210ENST00000490699 BACE2Q9Y5Z0 518 aa11.65□□□□□ -0.54
VARS2-210ENST00000490699 H3BNC9 293 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CXCL14O95715 111 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 SERPING1P05155 500 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 ADH1AP07327 375 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 PTPN1P18031 435 aaKnown RBP11.64□□□□□ -0.55
VARS2-210ENST00000490699 ACO1P21399 889 aaKnown RBP11.64□□□□□ -0.55
VARS2-210ENST00000490699 ANXA13P27216 316 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 ELF1P32519 619 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 NDUFV1P49821 464 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
VARS2-210ENST00000490699 ADKP55263 362 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms