RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ATF6P18850 670 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 CTHP32929 405 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 LAIR1Q6GTX8 287 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 ZNF720Q7Z2F6 126 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 NT5DC4Q86YG4 428 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 GIPC2Q8TF65 315 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 EPSTI1Q96J88 318 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 RBM12Q9NTZ6 932 aaKnown RBP19.19■□□□□ 0.66
YIPF3-208ENST00000490447 SEL1LQ9UBV2 794 aa19.19■□□□□ 0.66
YIPF3-208ENST00000490447 KPNA7A9QM74 516 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 PRAMEF12O95522 483 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 PDCP20941 246 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 WEE1P30291 646 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 AVPR1AP37288 418 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 PNPLA4P41247 253 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 TSPY1Q01534 308 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 GAS6Q14393 721 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 PON2Q15165 354 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 PTPAQ15257 358 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 WSCD1Q658N2 575 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 PCDHB5Q9Y5E4 795 aa19.18■□□□□ 0.66
YIPF3-208ENST00000490447 TSC2P49815 1807 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 CEP250Q9BV73 2442 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 GCNT3O95395 438 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 GAP43P17677 238 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 SIM2Q14190 667 aaPredicted RBP19.17■□□□□ 0.66
YIPF3-208ENST00000490447 RRAGBQ5VZM2 374 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 TXNDC11Q6PKC3 985 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 Q6ZS52 159 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 SV2BQ7L1I2 683 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 EFCAB13Q8IY85 973 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 LRRC3BQ96PB8 259 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 ACCSQ96QU6 501 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 CLIC4Q9Y696 253 aa19.17■□□□□ 0.66
YIPF3-208ENST00000490447 PAPSS2O95340 614 aaPredicted RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 LDHAP00338 332 aaKnown RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 HAPLN1P10915 354 aaPredicted RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 CNR2P34972 360 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 TFAMQ00059 246 aaKnown RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 TNK2Q07912 1038 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 SPEM2Q0P670 501 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 BFSP1Q12934 665 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 ITPRIPL2Q3MIP1 535 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 CRELD2Q6UXH1 353 aaPredicted RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 LONP2Q86WA8 852 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 CMTM8Q8IZV2 173 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 SYNPOQ8N3V7 929 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 CACTINQ8WUQ7 758 aaKnown RBP19.16■□□□□ 0.66
YIPF3-208ENST00000490447 IKZF4Q9H2S9 585 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 IL21Q9HBE4 155 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 TBC1D7Q9P0N9 293 aa19.16■□□□□ 0.66
YIPF3-208ENST00000490447 CHURC1-FNTBB4DL54 471 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 PPP1R37O75864 691 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 ITGB3P05106 788 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 RETP07949 1114 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 DDX6P26196 483 aaKnown RBP eCLIP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 ADSSP30520 456 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 POLR2BP30876 1174 aaKnown RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 FNTBP49356 437 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 ATXN1P54253 815 aaKnown RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 NFE2Q16621 373 aaPredicted RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 HEATR6Q6AI08 1181 aaKnown RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 USP49Q70CQ1 688 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 LRRTM3Q86VH5 581 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 SYCP3Q8IZU3 236 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 NOC3LQ8WTT2 800 aaKnown RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 SAAL1Q96ER3 474 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 RTKNQ9BST9 563 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 SLC46A2Q9BY10 475 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 SMG9Q9H0W8 520 aaKnown RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 MAGED2Q9UNF1 606 aaPredicted RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 PCDHB13Q9Y5F0 798 aa19.15■□□□□ 0.66
YIPF3-208ENST00000490447 SRPRBQ9Y5M8 271 aaKnown RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 NUP210Q8TEM1 1887 aaPredicted RBP19.15■□□□□ 0.66
YIPF3-208ENST00000490447 MYMKA6NI61 221 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 HUS1O60921 280 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 LRP3O75074 770 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 PRPF40AO75400 957 aaKnown RBP19.14■□□□□ 0.65
YIPF3-208ENST00000490447 CSH1P0DML2 217 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 CSH2P0DML3 217 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 IDEP14735 1019 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 MYL7Q01449 175 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 KCNA1Q09470 495 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 CCINQ13939 588 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 CCDC73Q6ZRK6 1079 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 BRSK2Q8IWQ3 736 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 MAB21L3Q8N8X9 362 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 MRPS31Q92665 395 aaKnown RBP19.14■□□□□ 0.65
YIPF3-208ENST00000490447 PI4K2AQ9BTU6 479 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 KIF9Q9HAQ2 790 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 PARD6AQ9NPB6 346 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 FBXO2Q9UK22 296 aaPredicted RBP19.14■□□□□ 0.65
YIPF3-208ENST00000490447 AGAP1Q9UPQ3 857 aa19.14■□□□□ 0.65
YIPF3-208ENST00000490447 R3HCC1Q9Y3T6 440 aaKnown RBP19.14■□□□□ 0.65
YIPF3-208ENST00000490447 K7ESF4 209 aa19.13■□□□□ 0.65
YIPF3-208ENST00000490447 TGM1P22735 817 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms