RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 KCNJ18B7U540 433 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 ANHXE9PGG2 379 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 CETN3O15182 167 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 MAPK13O15264 365 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 SPTLC1O15269 473 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 SEC24AO95486 1093 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 CYP11A1P05108 521 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 PTPN2P17706 415 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 PNPLA4P41247 253 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 TAF6P49848 677 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 NUBP1P53384 320 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 ADCY1Q08828 1119 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 HTR4Q13639 388 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 KCNJ12Q14500 433 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 KRT31Q15323 416 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 MTSS1LQ765P7 747 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 EFCAB13Q8IY85 973 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 GPD1LQ8N335 351 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 SLC44A3Q8N4M1 653 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 CACTINQ8WUQ7 758 aaKnown RBP11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 RSAD2Q8WXG1 361 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 FGF13Q92913 245 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 ZNF560Q96MR9 790 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 HCFC1R1Q9NWW0 138 aa11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 LIMA1Q9UHB6 759 aaKnown RBP11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 MRPS23Q9Y3D9 190 aaKnown RBP11.35□□□□□ -0.59
SCAMP4-208ENST00000489554 ZNF197O14709 1029 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 EXOC3O60645 756 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 PDGFBP01127 241 aaPredicted RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 RHOP08100 348 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 SRFP11831 508 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 RPL13P26373 211 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 EEF1GP26641 437 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 AVPR2P30518 371 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 PSMC2P35998 433 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 DLG4P78352 724 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 TFAMQ00059 246 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 GPR17Q13304 367 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 PLD1Q13393 1074 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 SNRNP35Q16560 246 aaKnown RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 SV2CQ496J9 727 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 CEP135Q66GS9 1140 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 IQCEQ6IPM2 695 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 RNF19BQ6ZMZ0 732 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 FRMD5Q7Z6J6 570 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 METTL23Q86XA0 190 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 FAM186BQ8IYM0 893 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 LEMD2Q8NC56 503 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 ITFG1Q8TB96 612 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 SLC35C1Q96A29 364 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 FAM84AQ96KN4 292 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 NAP1L5Q96NT1 182 aaPredicted RBP11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 MFSD1Q9H3U5 465 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 KIAA1586Q9HCI6 787 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 GDE1Q9NZC3 331 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 WNT16Q9UBV4 365 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 NUMBLQ9Y6R0 609 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 PTPRJQ12913 1337 aa11.34□□□□□ -0.59
SCAMP4-208ENST00000489554 A0A1B0GTH6 734 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 ZNF233A6NK53 670 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 KPNA7A9QM74 516 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 GOLGA6L19H0YKK7 550 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 CYB561D2O14569 222 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 NARSO43776 548 aaKnown RBP11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 MICAL2O94851 1124 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 CLCN5P51795 746 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 VCPP55072 806 aaKnown RBP11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 CLDN10P78369 228 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 FANCCQ00597 558 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 SURF1Q15526 300 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 TPD52L1Q16890 204 aaPredicted RBP11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 CYP4A22Q5TCH4 519 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 PDZD4Q76G19 769 aaPredicted RBP11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 NPAS3Q8IXF0 933 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 THEM5Q8N1Q8 247 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 LRRC52Q8N7C0 313 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 RDH13Q8NBN7 331 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 PARD3BQ8TEW8 1205 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 ZNF512Q96ME7 567 aaPredicted RBP11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 CORO1BQ9BR76 489 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 SLC2A4RGQ9NR83 387 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 TAB2Q9NYJ8 693 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 HSFX1Q9UBD0 423 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 YIPF1Q9Y548 306 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 ZNF318Q5VUA4 2279 aa11.33□□□□□ -0.6
SCAMP4-208ENST00000489554 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 FGFR1OPO95684 399 aaKnown RBP11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 GNA14O95837 355 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 ITGB3P05106 788 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 TPM3P06753 285 aa11.32□□□□□ -0.6
SCAMP4-208ENST00000489554 OR4Q2P0C623 313 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms