RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 AOX1Q06278 1338 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 LINC01548A6NM66 108 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 FZD9O00144 591 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 GABRDO14764 452 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 FTH1P19P0C7X4 201 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 CDK11BP21127 795 aaKnown RBP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 DRD4P21917 467 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 LPOP22079 712 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 PIK3CGP48736 1102 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 CCT8P50990 548 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 SLC10A2Q12908 348 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 HABP2Q14520 560 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 LLGL1Q15334 1064 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 SRSF7Q16629 238 aaKnown RBP eCLIP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 TAF2Q6P1X5 1199 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 MIER2Q8N344 545 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 C3orf20Q8ND61 904 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 RFKQ969G6 155 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 CCDC8Q9H0W5 538 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 SLAMF7Q9NQ25 335 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 FLRT1Q9NZU1 646 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 ZNF580Q9UK33 172 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 POLHQ9Y253 713 aa4.49□□□□□ -1.69
CBWD1-216ENST00000489272 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.49□□□□□ -1.69
CBWD1-216ENST00000489272 WDR91A4D1P6 747 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 DTNBO60941 627 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 KATNA1O75449 491 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 NXPH3O95157 252 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 ARIH2O95376 493 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 RARBP10826 455 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 ZFXP17010 805 aaPredicted RBP4.48□□□□□ -1.69
CBWD1-216ENST00000489272 CD6P30203 668 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 FXR1P51114 621 aaKnown RBP eCLIP4.48□□□□□ -1.69
CBWD1-216ENST00000489272 DSC2Q02487 901 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 GRM1Q13255 1194 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 BMPR2Q13873 1038 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 PTPN21Q16825 1174 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 RBM20Q5T481 1227 aaKnown RBP4.48□□□□□ -1.69
CBWD1-216ENST00000489272 TEDDM1Q5T9Z0 273 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 THEMIS2Q5TEJ8 643 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 ATRIPQ8WXE1 791 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 FAM136AQ96C01 138 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 TINAGL1Q9GZM7 467 aaPredicted RBP4.48□□□□□ -1.69
CBWD1-216ENST00000489272 SMOC2Q9H3U7 446 aa4.48□□□□□ -1.69
CBWD1-216ENST00000489272 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 LRRC14BA6NHZ5 514 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 VPS4BO75351 444 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 GNAI2P04899 355 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 HNRNPCP07910 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
CBWD1-216ENST00000489272 CHRM3P20309 590 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 PHKA1P46020 1223 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 KIF22Q14807 665 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 TBCCQ15814 346 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
CBWD1-216ENST00000489272 SLC13A1Q9BZW2 595 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 AMBRA1Q9C0C7 1298 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 FEZ2Q9UHY8 353 aaPredicted RBP4.47□□□□□ -1.69
CBWD1-216ENST00000489272 RAD54BQ9Y620 910 aa4.47□□□□□ -1.69
CBWD1-216ENST00000489272 TARM1B6A8C7 271 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 ALG1L2C9J202 215 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 SLC16A6O15403 523 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 KIF20AO95235 890 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 NDUFB7P17568 137 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 CCND1P24385 295 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 PRDX5P30044 214 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 CDKN1CP49918 316 aaPredicted RBP4.46□□□□□ -1.7
CBWD1-216ENST00000489272 TCF15Q12870 199 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 FAM50AQ14320 339 aaKnown RBP4.46□□□□□ -1.7
CBWD1-216ENST00000489272 TMEM119Q4V9L6 283 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 FAM90A1Q86YD7 464 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 DDX17Q92841 729 aaKnown RBP4.46□□□□□ -1.7
CBWD1-216ENST00000489272 TNPO1Q92973 898 aaKnown RBP4.46□□□□□ -1.7
CBWD1-216ENST00000489272 C1orf43Q9BWL3 253 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 WDCPQ9H6R7 721 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 SERTAD4Q9NUC0 356 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 MRPS18AQ9NVS2 196 aaKnown RBP4.46□□□□□ -1.7
CBWD1-216ENST00000489272 DKK3Q9UBP4 350 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 ZDHHC8Q9ULC8 765 aa4.46□□□□□ -1.7
CBWD1-216ENST00000489272 PRSS29PA6NIE9 313 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 M0QYG6 137 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 GCLCP48506 637 aaPredicted RBP4.45□□□□□ -1.7
CBWD1-216ENST00000489272 TFF2Q03403 129 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 EIF2B5Q13144 721 aaKnown RBP4.45□□□□□ -1.7
CBWD1-216ENST00000489272 NOGQ13253 232 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 ODF1Q14990 250 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 ZNF618Q5T7W0 954 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 VPS53Q5VIR6 699 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 CEP85Q6P2H3 762 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 ZNF782Q6ZMW2 699 aaPredicted RBP4.45□□□□□ -1.7
CBWD1-216ENST00000489272 SLC29A4Q7RTT9 530 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 PPP1R32Q7Z5V6 425 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 PRPF38AQ8NAV1 312 aaKnown RBP4.45□□□□□ -1.7
CBWD1-216ENST00000489272 KLHDC4Q8TBB5 520 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 RGMAQ96B86 450 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 ARHGEF3Q9NR81 526 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 ABCF2Q9UG63 623 aa4.45□□□□□ -1.7
CBWD1-216ENST00000489272 SERGEFQ9UGK8 458 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms