RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FASTKD5Q7L8L6 764 aaKnown RBP18.37■□□□□ 0.53
NPHP4-209ENST00000489180 PATL1Q86TB9 770 aaKnown RBP18.37■□□□□ 0.53
NPHP4-209ENST00000489180 RIBC1Q8N443 379 aaPredicted RBP18.37■□□□□ 0.53
NPHP4-209ENST00000489180 SHCBP1Q8NEM2 672 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 DCUN1D1Q96GG9 259 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 TRIM45Q9H8W5 580 aaPredicted RBP18.37■□□□□ 0.53
NPHP4-209ENST00000489180 PPCSQ9HAB8 311 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 KCNH7Q9NS40 1196 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 SPDYE5A6NIY4 337 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 FKBP9O95302 570 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 RCN1Q15293 331 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 SPDYE7PQ495Y7 208 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 FKBP9P1Q75LS8 142 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 PABPC3Q9H361 631 aaKnown RBP18.37■□□□□ 0.53
NPHP4-209ENST00000489180 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 SGO1Q5FBB7 561 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 FOXP3Q9BZS1 431 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 HEY2Q9UBP5 337 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
NPHP4-209ENST00000489180 PSMD3O43242 534 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 TMBIM4Q9HC24 238 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 TMEM161AQ9NX61 479 aa18.37■□□□□ 0.53
NPHP4-209ENST00000489180 ZNF263O14978 683 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 H2AFXP16104 143 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 VHLP40337 213 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 NUDT2P50583 147 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 ELOA2Q8IYF1 753 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 SEPT1Q8WYJ6 367 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 MKNK1Q9BUB5 465 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 TARS2Q9BW92 718 aaKnown RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 TEX13BQ9BXU2 312 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 FAM95CA0A1B0GW59 222 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 MSH4O15457 936 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 SPAG6O75602 509 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 TRIM60Q495X7 471 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 TRIM65Q6PJ69 517 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 PCYOX1LQ8NBM8 494 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 NIF3L1Q9GZT8 377 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 LATS2Q9NRM7 1088 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 ITM2BQ9Y287 266 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 AP3B1O00203 1094 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 SF3B3Q15393 1217 aaKnown RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 PRAMEF18Q5VWM3 479 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 GPBP1L1Q9HC44 474 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 PKP3Q9Y446 797 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 DEAF1O75398 565 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 MED24O75448 989 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 NQO1P15559 274 aaKnown RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 TJAP1Q5JTD0 557 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 VPS50Q96JG6 964 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 IRF1P10914 325 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 RAD51Q06609 339 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 PDK1Q15118 436 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
NPHP4-209ENST00000489180 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 FARP1Q9Y4F1 1045 aaPredicted RBP18.36■□□□□ 0.53
NPHP4-209ENST00000489180 SLC26A4O43511 780 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 HIST1H2AGP0C0S8 130 aaPredicted RBP18.35■□□□□ 0.53
NPHP4-209ENST00000489180 CYP11B2P19099 503 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 HIST1H2ADP20671 130 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 KLRK1P26718 216 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 SYTL3Q4VX76 610 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 WDR93Q6P2C0 686 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 KCNV1Q6PIU1 500 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 DENND5BQ6ZUT9 1274 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 HIST1H2AHQ96KK5 128 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 HIST1H2AJQ99878 128 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 H2AFJQ9BTM1 129 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 CARD9Q9H257 536 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 SEMA6BQ9H3T3 888 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 SMARCAD1Q9H4L7 1026 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 TBX20Q9UMR3 447 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 ATP11BQ9Y2G3 1177 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 C16orf96A6NNT2 1141 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 WDR47O94967 919 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 SCTRP47872 440 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 FBXO36Q8NEA4 188 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 LACRTQ9GZZ8 138 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 CDY2AQ9Y6F7 541 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 CDY1Q9Y6F8 540 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 IGSF9BQ9UPX0 1349 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 COPAP53621 1224 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 AMHR2Q16671 573 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 PRR5LQ6MZQ0 368 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 CAAP1Q9H8G2 361 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 ZNF70Q9UC06 446 aaPredicted RBP18.35■□□□□ 0.53
NPHP4-209ENST00000489180 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 SERPINB5P36952 375 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 FNTAP49354 379 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 KCNMA1Q12791 1236 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 EFCAB12Q6NXP0 572 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 ZNF677Q86XU0 584 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 MICALL2Q8IY33 904 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 GPRC5CQ9NQ84 441 aa18.35■□□□□ 0.53
NPHP4-209ENST00000489180 CDV3Q9UKY7 258 aaKnown RBP18.35■□□□□ 0.53
NPHP4-209ENST00000489180 DYNC1LI2O43237 492 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms