RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 HES2Q9Y543 173 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 PPME1Q9Y570 386 aa19.29■□□□□ 0.68
POLR2J3-205ENST00000489144 LCA5LO95447 670 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 AKR1A1P14550 325 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 MCL1Q07820 350 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 SGSM1Q2NKQ1 1148 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 CCDC70Q6NSX1 233 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 ALKBH5Q6P6C2 394 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 EXOC8Q8IYI6 725 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 TMEM40Q8WWA1 233 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 PDZD7Q9H5P4 517 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 PPANQ9NQ55 473 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 CYBAP13498 195 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 YY1P25490 414 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 CPT1AP50416 773 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 SP3Q02447 781 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 ZACNQ401N2 412 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 FAM47CQ5HY64 1035 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 ANKRD20A2Q5SQ80 823 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 ANKRD20A1Q5TYW2 823 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 ANKRD20A3Q5VUR7 823 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 SCARA5Q6ZMJ2 495 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 SDR16C5Q8N3Y7 309 aa19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 NAF1Q96HR8 494 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-205ENST00000489144 MAP3K13O43283 966 aa19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 PURAQ00577 322 aaKnown RBP19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 BRSK2Q8IWQ3 736 aa19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 ZNF784Q8NCA9 323 aaPredicted RBP19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 TSEN2Q8NCE0 465 aaKnown RBP19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 CAPZA3Q96KX2 299 aa19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 CGRRF1Q99675 332 aa19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 KIAA1586Q9HCI6 787 aa19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 PREBQ9HCU5 417 aa19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 CPSF3Q9UKF6 684 aaKnown RBP19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 PACSIN2Q9UNF0 486 aaPredicted RBP19.27■□□□□ 0.68
POLR2J3-205ENST00000489144 C5orf60A6NFR6 353 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 CFAP73A6NFT4 308 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 P4HA2O15460 535 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 TSPAN1O60635 241 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 LDHAP00338 332 aaKnown RBP19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 IGHA2P01877 340 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 PROZP22891 400 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 EMBQ6PCB8 327 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 C15orf39Q6ZRI6 1047 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 NOP9Q86U38 636 aaKnown RBP19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 SLC35B4Q969S0 331 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 ZIM3Q96PE6 472 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 WDR37Q9Y2I8 494 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 GMEB1Q9Y692 573 aa19.27■□□□□ 0.67
POLR2J3-205ENST00000489144 ZNF185O15231 689 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 NFICP08651 508 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 CXCR5P32302 372 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 PRKCIP41743 596 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 EPHB4P54760 987 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 MFSD14CQ5VZR4 134 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 USP37Q86T82 979 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 APOL6Q9BWW8 343 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 COQ4Q9Y3A0 265 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 SAR1BQ9Y6B6 198 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 COL1A2P08123 1366 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 ASAP2O43150 1006 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 FTCDO95954 541 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 GSTA1P08263 222 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 KRT19P08727 400 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 STAG3L1P0CL83 205 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 POLE2P56282 527 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 MYL6P60660 151 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 BYSLQ13895 437 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 TAF11Q15544 211 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 C7orf31Q8N865 590 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 C1orf131Q8NDD1 294 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 C1orf112Q9NSG2 853 aa19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 PRMT7Q9NVM4 692 aaPredicted RBP19.26■□□□□ 0.67
POLR2J3-205ENST00000489144 TMEM221A6NGB7 291 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 KRT14P02533 472 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 MMEP08473 750 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 VEGFBP49765 207 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 NCOA4Q13772 614 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 PHLDB2Q86SQ0 1253 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 RNF168Q8IYW5 571 aaPredicted RBP19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 EIF2AQ9BY44 585 aaKnown RBP19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 TMEM98Q9Y2Y6 226 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 ATMINO43313 823 aaPredicted RBP19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 GPR32O75388 356 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 CTSHP09668 335 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 CD58P19256 250 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 QPCTQ16769 361 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 ZNF394Q53GI3 561 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 C2CD6Q53TS8 623 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 ANO7Q6IWH7 933 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 GBP7Q8N8V2 638 aaPredicted RBP19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 WNT8BQ93098 351 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 HHIPL1Q96JK4 782 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 PCDHB18PQ96TA0 734 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 ADAMTS10Q9H324 1103 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 SMARCAL1Q9NZC9 954 aa19.25■□□□□ 0.67
POLR2J3-205ENST00000489144 TMCO1Q9UM00 188 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms