RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ASB16Q96NS5 453 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 DDX43Q9NXZ2 648 aaKnown RBP15.08■□□□□ 0
VTI1A-206ENST00000489142 COL4A2P08572 1712 aa15.08■□□□□ 0
VTI1A-206ENST00000489142 NUP210Q8TEM1 1887 aaPredicted RBP15.08■□□□□ 0
VTI1A-206ENST00000489142 DENND4CQ5VZ89 1909 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 HUS1O60921 280 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 TNNC2P02585 160 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 CYP24A1Q07973 514 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 SDHAF4Q5VUM1 108 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 VITQ6UXI7 678 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 HS2ST1Q7LGA3 356 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 CCDC105Q8IYK2 499 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 ADGRF2Q8IZF7 708 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 LRRC52Q8N7C0 313 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 ELSPBP1Q96BH3 223 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 HPDLQ96IR7 371 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 GOLPH3LQ9H4A5 285 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 ZFP14Q9HCL3 533 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 EXOC1Q9NV70 894 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 HPSEQ9Y251 543 aa15.07■□□□□ 0
VTI1A-206ENST00000489142 MTF2Q9Y483 593 aaPredicted RBP15.07■□□□□ 0
VTI1A-206ENST00000489142 MICAL2O94851 1124 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 TNNI1P19237 187 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 GABRR2P28476 465 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 SYKP43405 635 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 CASP4P49662 377 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 CYP4F8P98187 520 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 TSPY1Q01534 308 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 MLF2Q15773 248 aaPredicted RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 KNOP1Q1ED39 458 aaKnown RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 DUOXA2Q1HG44 320 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 BMT2Q1RMZ1 405 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 SOWAHAQ2M3V2 549 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 SLC44A4Q53GD3 710 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 GAREM2Q75VX8 874 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 WDR49Q8IV35 697 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 DCP1BQ8IZD4 617 aaKnown RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 FSIP1Q8NA03 581 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 DTWD2Q8NBA8 298 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 XXYLT1Q8NBI6 393 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 LEMD2Q8NC56 503 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 SMARCD2Q92925 531 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 PSMG2Q969U7 264 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 RSPRY1Q96DX4 576 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 CGRRF1Q99675 332 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 GZF1Q9H116 711 aaPredicted RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 ATXN3LQ9H3M9 355 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 KIAA1586Q9HCI6 787 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 HEBP1Q9NRV9 189 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 SIT1Q9Y3P8 196 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 R3HCC1Q9Y3T6 440 aaKnown RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 CACNA1HO95180 2353 aa15.06■□□□□ 0
VTI1A-206ENST00000489142 KIF26AQ9ULI4 1882 aaPredicted RBP15.06■□□□□ 0
VTI1A-206ENST00000489142 ZNF638Q14966 1978 aaKnown RBP15.05■□□□□ 0
VTI1A-206ENST00000489142 EXOC3O60645 756 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 ATP2C2O75185 946 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 PRPF40AO75400 957 aaKnown RBP15.05■□□□□ -0
VTI1A-206ENST00000489142 GLULP15104 373 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 TUFMP49411 452 aaKnown RBP15.05■□□□□ -0
VTI1A-206ENST00000489142 PSMC1P62191 440 aaKnown RBP15.05■□□□□ -0
VTI1A-206ENST00000489142 MYO1EQ12965 1108 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 UBXN2BQ14CS0 331 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 VEPH1Q14D04 833 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 PSMD6Q15008 389 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 INTS6LQ5JSJ4 861 aaKnown RBP15.05■□□□□ -0
VTI1A-206ENST00000489142 GPR158Q5T848 1215 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 TPRG1Q6ZUI0 275 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 TRAPPC11Q7Z392 1133 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 ITIH5Q86UX2 942 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 PJA1Q8NG27 643 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 SPPL2BQ8TCT7 592 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 PLEKHO2Q8TD55 490 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 ELMO3Q96BJ8 720 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 FNBP1Q96RU3 617 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 GDAP2Q9NXN4 497 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 GTF3C4Q9UKN8 822 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 PCDHB5Q9Y5E4 795 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 MYO15AQ9UKN7 3530 aa15.05■□□□□ -0
VTI1A-206ENST00000489142 PTPRDP23468 1912 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 PATJQ8NI35 1801 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 HEPACAM2A8MVW5 462 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 CST3P01034 146 aaPredicted RBP15.04■□□□□ -0
VTI1A-206ENST00000489142 CYP2F1P24903 491 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 LMO2P25791 158 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 GDI1P31150 447 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 NUBP1P53384 320 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 STARD6P59095 220 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 MYL7Q01449 175 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 PFKPQ01813 784 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 ANGPT1Q15389 498 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 SURF1Q15526 300 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 TAF12Q16514 161 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 PHLDB3Q6NSJ2 640 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 TMEM86AQ8N2M4 240 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 TOP6BLQ8N6T0 577 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 C2orf15Q8WU43 125 aaKnown RBP15.04■□□□□ -0
VTI1A-206ENST00000489142 KBTBD7Q8WVZ9 684 aa15.04■□□□□ -0
VTI1A-206ENST00000489142 ZNF516Q92618 1163 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms