RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 RUSC1Q9BVN2 902 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 HAPLN2Q9GZV7 340 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 HSFX1Q9UBD0 423 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 UBQLN1Q9UMX0 589 aaKnown RBP17.57■□□□□ 0.4
USP48-210ENST00000489108 LHX6Q9UPM6 363 aa17.57■□□□□ 0.4
USP48-210ENST00000489108 LACTBL1A8MY62 500 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 CLDN3O15551 220 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 CYP3A5P20815 502 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
USP48-210ENST00000489108 DGKEP52429 567 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 AMPD2Q01433 879 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 STRN3Q13033 797 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 DMC1Q14565 340 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 VEPH1Q14D04 833 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 TAF12Q16514 161 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 UAP1L1Q3KQV9 507 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 SLC39A12Q504Y0 691 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 RINT1Q6NUQ1 792 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 DEFB124Q8NES8 71 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 OR10T2Q8NGX3 314 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 ZCCHC14Q8WYQ9 949 aaKnown RBP17.56■□□□□ 0.4
USP48-210ENST00000489108 EZH1Q92800 747 aaPredicted RBP17.56■□□□□ 0.4
USP48-210ENST00000489108 GTF3C6Q969F1 213 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 SENP8Q96LD8 212 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 DRC1Q96MC2 740 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 P2RY13Q9BPV8 354 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 NTPCRQ9BSD7 190 aaKnown RBP17.56■□□□□ 0.4
USP48-210ENST00000489108 DNM3Q9UQ16 869 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 WDFY3Q8IZQ1 3526 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 PKD1L2Q7Z442 2459 aa17.56■□□□□ 0.4
USP48-210ENST00000489108 ANKRD11Q6UB99 2663 aaPredicted RBP17.55■□□□□ 0.4
USP48-210ENST00000489108 ASCC3Q8N3C0 2202 aaKnown RBP17.55■□□□□ 0.4
USP48-210ENST00000489108 CLTAP09496 248 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 AVPR1AP37288 418 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 TNFSF9P41273 254 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP48-210ENST00000489108 LILRA4P59901 499 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 IRX4P78413 519 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 MCL1Q07820 350 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 BFSP1Q12934 665 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 FBXO43Q4G163 708 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 KIAA1211LQ6NV74 962 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 CC2D1AQ6P1N0 951 aaPredicted RBP17.55■□□□□ 0.4
USP48-210ENST00000489108 C1orf186Q6ZWK4 172 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 TMEM150AQ86TG1 271 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 C4orf32Q8N8J7 132 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 RIN3Q8TB24 985 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 C17orf75Q9HAS0 396 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 TDP1Q9NUW8 608 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 TBX20Q9UMR3 447 aa17.55■□□□□ 0.4
USP48-210ENST00000489108 PCNX2A6NKB5 2137 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 DMXL2Q8TDJ6 3036 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 SOBPA7XYQ1 873 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 F11P03951 625 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 ODC1P11926 461 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
USP48-210ENST00000489108 GJA4P35212 333 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 PSMD2Q13200 908 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 ORC2Q13416 577 aaPredicted RBP17.54■□□□□ 0.4
USP48-210ENST00000489108 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 PMS2CLQ68D20 193 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 ZPBP2Q6X784 338 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 TMEM161BQ8NDZ6 487 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 SNX29Q8TEQ0 813 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 ZCWPW1Q9H0M4 648 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 ZMYM5Q9UJ78 669 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 MYO16Q9Y6X6 1858 aa17.54■□□□□ 0.4
USP48-210ENST00000489108 XPOTO43592 962 aaKnown RBP17.53■□□□□ 0.4
USP48-210ENST00000489108 HYAL3O43820 417 aaPredicted RBP17.53■□□□□ 0.4
USP48-210ENST00000489108 MAPTP10636 758 aaKnown RBP17.53■□□□□ 0.4
USP48-210ENST00000489108 NLRP12P59046 1061 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 PPP2R3AQ06190 1150 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 RAD51AP2Q09MP3 1159 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 PDIA5Q14554 519 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 SAFBQ15424 915 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP48-210ENST00000489108 USP39Q53GS9 565 aaKnown RBP17.53■□□□□ 0.4
USP48-210ENST00000489108 TTC38Q5R3I4 469 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 TXNDC8Q6A555 127 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 LRRTM3Q86VH5 581 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 SPIRE2Q8WWL2 714 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 TPSD1Q9BZJ3 242 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.53■□□□□ 0.4
USP48-210ENST00000489108 MYH11P35749 1972 aa17.53■□□□□ 0.4
USP48-210ENST00000489108 DSPP15924 2871 aaKnown RBP17.53■□□□□ 0.4
USP48-210ENST00000489108 HAPLN1P10915 354 aaPredicted RBP17.52■□□□□ 0.4
USP48-210ENST00000489108 HMGA1P17096 107 aaKnown RBP17.52■□□□□ 0.4
USP48-210ENST00000489108 BCKDHBP21953 392 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 PDGFRLQ15198 375 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 SPATA1Q5VX52 437 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 KCNK18Q7Z418 384 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 CYP2U1Q7Z449 544 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 TSTD1Q8NFU3 115 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 PIGKQ92643 395 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 CD101Q93033 1021 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 ACDQ96AP0 544 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 ECT2Q9H8V3 914 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 KIF9Q9HAQ2 790 aa17.52■□□□□ 0.4
USP48-210ENST00000489108 NEUROG3Q9Y4Z2 214 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms