RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 DPYDQ12882 1025 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 TEAD2Q15562 447 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 SOWAHAQ2M3V2 549 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 LIMS2Q7Z4I7 341 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 DNAJB7Q7Z6W7 309 aaPredicted RBP26.85■■□□□ 1.89
HMGN1-217ENST00000489072 DCP1BQ8IZD4 617 aaKnown RBP26.85■■□□□ 1.89
HMGN1-217ENST00000489072 TMEM86AQ8N2M4 240 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 TOP6BLQ8N6T0 577 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 SPPL2BQ8TCT7 592 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 PLEKHO2Q8TD55 490 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 C2orf15Q8WU43 125 aaKnown RBP26.85■■□□□ 1.89
HMGN1-217ENST00000489072 ZNF516Q92618 1163 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 PSMG2Q969U7 264 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 ASB16Q96NS5 453 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 PRRX2Q99811 253 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 LPIN3Q9BQK8 851 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 ARHGEF3Q9NR81 526 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 DDX43Q9NXZ2 648 aaKnown RBP26.85■■□□□ 1.89
HMGN1-217ENST00000489072 ABI2Q9NYB9 513 aaPredicted RBP26.85■■□□□ 1.89
HMGN1-217ENST00000489072 ASB3Q9Y575 518 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 COL4A3Q01955 1670 aa26.85■■□□□ 1.89
HMGN1-217ENST00000489072 HCRTO43612 131 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 EXOC3O60645 756 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 ZNF202O95125 648 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 HAPLN1P10915 354 aaPredicted RBP26.84■■□□□ 1.89
HMGN1-217ENST00000489072 TNNI1P19237 187 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 AOC1P19801 751 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 ACAT1P24752 427 aaKnown RBP26.84■■□□□ 1.89
HMGN1-217ENST00000489072 TUFMP49411 452 aaKnown RBP26.84■■□□□ 1.89
HMGN1-217ENST00000489072 TSPY1Q01534 308 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 SMARCB1Q12824 385 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 MYO1EQ12965 1108 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 MGAT5BQ3V5L5 792 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 ADGRF2Q8IZF7 708 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 GOLGA5Q8TBA6 731 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 ELSPBP1Q96BH3 223 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 FNBP1Q96RU3 617 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 PKMYT1Q99640 499 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 ACBD6Q9BR61 282 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 DMAC2Q9NW81 257 aa26.84■■□□□ 1.89
HMGN1-217ENST00000489072 A0A1W2PRU2 124 aa26.83■■□□□ 1.89
HMGN1-217ENST00000489072 GABRDO14764 452 aa26.83■■□□□ 1.89
HMGN1-217ENST00000489072 CST3P01034 146 aaPredicted RBP26.83■■□□□ 1.89
HMGN1-217ENST00000489072 PTPN5P54829 565 aa26.83■■□□□ 1.89
HMGN1-217ENST00000489072 CCDC142Q17RM4 750 aa26.83■■□□□ 1.89
HMGN1-217ENST00000489072 TBC1D17Q9HA65 648 aa26.83■■□□□ 1.89
HMGN1-217ENST00000489072 R3HCC1Q9Y3T6 440 aaKnown RBP26.83■■□□□ 1.89
HMGN1-217ENST00000489072 GALR2O43603 387 aaPredicted RBP26.82■■□□□ 1.88
HMGN1-217ENST00000489072 PRPF40AO75400 957 aaKnown RBP26.82■■□□□ 1.88
HMGN1-217ENST00000489072 RHOBTB3O94955 611 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 CASP4P49662 377 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 NUBP1P53384 320 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 NUCB2P80303 420 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 MYL7Q01449 175 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 INTS6LQ5JSJ4 861 aaKnown RBP26.82■■□□□ 1.88
HMGN1-217ENST00000489072 GAREM2Q75VX8 874 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 SPATA18Q8TC71 538 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 KBTBD7Q8WVZ9 684 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 PCDHB5Q9Y5E4 795 aa26.82■■□□□ 1.88
HMGN1-217ENST00000489072 STXBP5Q5T5C0 1151 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 ITIH5Q86UX2 942 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 SLC9A9Q8IVB4 645 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 ZSCAN18Q8TBC5 510 aaPredicted RBP26.81■■□□□ 1.88
HMGN1-217ENST00000489072 FAM200AQ8TCP9 573 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 GIPC2Q8TF65 315 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 TMEM174Q8WUU8 243 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 SMARCD2Q92925 531 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 PI4K2AQ9BTU6 479 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 ZFP14Q9HCL3 533 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 NCANO14594 1321 aa26.81■■□□□ 1.88
HMGN1-217ENST00000489072 DENND4CQ5VZ89 1909 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 STK25O00506 426 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 PDXKO00764 312 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 VIPR2P41587 438 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 LHX1P48742 406 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 SNW1Q13573 536 aaKnown RBP26.8■■□□□ 1.88
HMGN1-217ENST00000489072 NFE2Q16621 373 aaPredicted RBP26.8■■□□□ 1.88
HMGN1-217ENST00000489072 PHLDB3Q6NSJ2 640 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 DPH6Q7L8W6 267 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 MKNK1Q9BUB5 465 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 TRPV4Q9HBA0 871 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 GTF3C4Q9UKN8 822 aa26.8■■□□□ 1.88
HMGN1-217ENST00000489072 NR3C1P04150 777 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 GABRR2P28476 465 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 GPR15P49685 360 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 GRM2Q14416 872 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 VEPH1Q14D04 833 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 PARD3BQ8TEW8 1205 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 SLITRK6Q9H5Y7 841 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 IL21Q9HBE4 155 aa26.79■■□□□ 1.88
HMGN1-217ENST00000489072 NUP210Q8TEM1 1887 aaPredicted RBP26.79■■□□□ 1.88
HMGN1-217ENST00000489072 MYBPHLA2RUH7 354 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 LRRIQ3A6PVS8 624 aaPredicted RBP26.78■■□□□ 1.88
HMGN1-217ENST00000489072 ATP2C2O75185 946 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 LMO2P25791 158 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 PCSK1P29120 753 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 STARD6P59095 220 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 SLC44A4Q53GD3 710 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 VITQ6UXI7 678 aa26.78■■□□□ 1.88
HMGN1-217ENST00000489072 FMR1NBQ8N0W7 255 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms