RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 AGPAT1Q99943 283 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 RTP3Q9BQQ7 232 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 AAASQ9NRG9 546 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 NENFQ9UMX5 172 aa17.06■□□□□ 0.32
CLDN11-208ENST00000488989 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 H0YGN5 161 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 TKTP29401 623 aaKnown RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 CYLC1P35663 651 aaPredicted RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 PPM1AP35813 382 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 FMO1Q01740 532 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 ARHGAP17Q68EM7 881 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 LNX1Q8TBB1 728 aaPredicted RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 SLC20A1Q8WUM9 679 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 TNIP3Q96KP6 325 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 CCDC42Q96M95 316 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 ZSWIM1Q9BR11 485 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 ACBD6Q9BR61 282 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 VN1R3Q9BXE9 311 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 UBE2OQ9C0C9 1292 aaKnown RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 DNAI2Q9GZS0 605 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 DDX43Q9NXZ2 648 aaKnown RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 SPG21Q9NZD8 308 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 CDH9Q9ULB4 789 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 PCDHGC3Q9UN70 934 aa17.05■□□□□ 0.32
CLDN11-208ENST00000488989 TIMM13Q9Y5L4 95 aaPredicted RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 EPN1Q9Y6I3 576 aaPredicted RBP17.05■□□□□ 0.32
CLDN11-208ENST00000488989 LCHNA4D1U4 455 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 EIF3CLB5ME19 914 aaKnown RBP17.04■□□□□ 0.32
CLDN11-208ENST00000488989 DDX3XO00571 662 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLDN11-208ENST00000488989 NDUFA10O95299 355 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 CALCAP01258 141 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 TNFAIP3P21580 790 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 PCSK1P29120 753 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 KIF11P52732 1056 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 YWHAHQ04917 246 aaPredicted RBP17.04■□□□□ 0.32
CLDN11-208ENST00000488989 MTF1Q14872 753 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 STILQ15468 1287 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 SLC18A3Q16572 532 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 OVOS1Q6IE37 1185 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 VPS36Q86VN1 386 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 TMEM169Q96HH4 297 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 EIF3CQ99613 913 aaKnown RBP17.04■□□□□ 0.32
CLDN11-208ENST00000488989 DPEP3Q9H4B8 488 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 CHST7Q9NS84 486 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 STK39Q9UEW8 545 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 PCDHB12Q9Y5F1 795 aa17.04■□□□□ 0.32
CLDN11-208ENST00000488989 A0A087X0T9 212 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 O00370 1275 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 THAP12O43422 761 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 MED7O43513 233 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 HCRTO43612 131 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 TBC1D4O60343 1298 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 SOD2P04179 222 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 MMEP08473 750 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 PDGFRBP09619 1106 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 FAM228BP0C875 321 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 BRD2P25440 801 aaKnown RBP17.03■□□□□ 0.32
CLDN11-208ENST00000488989 PLCB3Q01970 1234 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 ORC1Q13415 861 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 CNGA2Q16280 664 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 VARS2Q5ST30 1063 aaKnown RBP17.03■□□□□ 0.32
CLDN11-208ENST00000488989 KIAA0319Q5VV43 1072 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 DDX53Q86TM3 631 aaKnown RBP17.03■□□□□ 0.32
CLDN11-208ENST00000488989 ACOT1Q86TX2 421 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 GPR65Q8IYL9 337 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 THEM5Q8N1Q8 247 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 B3GALNT2Q8NCR0 500 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 HEXIM2Q96MH2 286 aaKnown RBP17.03■□□□□ 0.32
CLDN11-208ENST00000488989 PKMYT1Q99640 499 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 SYT15Q9BQS2 421 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 HERC2P3Q9BVR0 1158 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 OXCT2Q9BYC2 517 aaPredicted RBP17.03■□□□□ 0.32
CLDN11-208ENST00000488989 DEF6Q9H4E7 631 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 ADAMTS1Q9UHI8 967 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
CLDN11-208ENST00000488989 ATP8B3O60423 1300 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 ZNF263O14978 683 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 AKR1B10O60218 316 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 CYP1A1P04798 512 aaPredicted RBP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 GZMAP12544 262 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 CD19P15391 556 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 PTPN1P18031 435 aaKnown RBP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 CDH5P33151 784 aaPredicted RBP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 RABGGTBP53611 331 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 USP41Q3LFD5 358 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 INTS6LQ5JSJ4 861 aaKnown RBP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 FAM109BQ6ICB4 259 aaPredicted RBP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 LCLAT1Q6UWP7 414 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 TAS1R1Q7RTX1 841 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 GLYCTKQ8IVS8 523 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 OR10T2Q8NGX3 314 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 PCDHB18PQ96TA0 734 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms