RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 TRDMT1O14717 391 aaKnown RBP11.66□□□□□ -0.54
YIPF3-207ENST00000488966 EGFP01133 1207 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 ARSAP15289 507 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 NLRP12P59046 1061 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 SHC2P98077 582 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
YIPF3-207ENST00000488966 RUNX3Q13761 415 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 TMEM132DQ14C87 1099 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 TAF12Q16514 161 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 PLA2G2CQ5R387 149 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 NAIF1Q69YI7 327 aaPredicted RBP11.66□□□□□ -0.54
YIPF3-207ENST00000488966 CD302Q8IX05 232 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 KCTD17Q8N5Z5 321 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 MAB21L3Q8N8X9 362 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 RIN3Q8TB24 985 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 USP13Q92995 863 aaPredicted RBP11.66□□□□□ -0.54
YIPF3-207ENST00000488966 GCNAQ96QF7 691 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 MSTO1Q9BUK6 570 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 EBF3Q9H4W6 596 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 CPSF3Q9UKF6 684 aaKnown RBP11.66□□□□□ -0.54
YIPF3-207ENST00000488966 SLC8A2Q9UPR5 921 aa11.66□□□□□ -0.54
YIPF3-207ENST00000488966 MAP1BP46821 2468 aaKnown RBP11.66□□□□□ -0.54
YIPF3-207ENST00000488966 CITO14578 2027 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 VWA3AA6NCI4 1184 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 K7ENM7 598 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 CYB561D2O14569 222 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 ATG13O75143 517 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 RNF40O75150 1001 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 F11P03951 625 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 CCDC192P0DO97 292 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 HAPLN1P10915 354 aaPredicted RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 HMGA1P17096 107 aaKnown RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 PAX3P23760 479 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 MPLP40238 635 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 ACOT2P49753 483 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 PTPAQ15257 358 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 TCEAL6Q6IPX3 200 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 GPBP1Q86WP2 473 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 MYCT1Q8N699 235 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 LRRC15Q8TF66 581 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 TCEAL3Q969E4 200 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 CDK5RAP3Q96JB5 506 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 ZC3H10Q96K80 434 aaKnown RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 ZSCAN31Q96LW9 406 aaPredicted RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 PYM1Q9BRP8 204 aaKnown RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 LSM14BQ9BX40 385 aaKnown RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 SH2B1Q9NRF2 756 aaPredicted RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 ABI2Q9NYB9 513 aaPredicted RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 RALYQ9UKM9 306 aaKnown RBP11.65□□□□□ -0.54
YIPF3-207ENST00000488966 DSEQ9UL01 958 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 ODF2LQ9ULJ1 636 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 PCDHGA5Q9Y5G8 931 aa11.65□□□□□ -0.54
YIPF3-207ENST00000488966 TISP43B9A030 160 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 ANKRD63C9JTQ0 380 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 AKAP3O75969 853 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 FAM13AO94988 1023 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 KCNK5O95279 499 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 AVPR1AP37288 418 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 GPR15P49685 360 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 GALK1P51570 392 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 ZNF131P52739 623 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 BFSP1Q12934 665 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
YIPF3-207ENST00000488966 PLK5Q496M5 336 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 RILPL1Q5EBL4 403 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 TXNDC8Q6A555 127 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 METTL23Q86XA0 190 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 THEM5Q8N1Q8 247 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 CAMKK1Q8N5S9 505 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 SPPL2BQ8TCT7 592 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 C2orf15Q8WU43 125 aaKnown RBP11.64□□□□□ -0.55
YIPF3-207ENST00000488966 FIZ1Q96SL8 496 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 PARVGQ9HBI0 331 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 TMLHEQ9NVH6 421 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 DERAQ9Y315 318 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 C2CD2Q9Y426 696 aa11.64□□□□□ -0.55
YIPF3-207ENST00000488966 PDCD11Q14690 1871 aaKnown RBP11.63□□□□□ -0.55
YIPF3-207ENST00000488966 DCLK1O15075 740 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 TRAK2O60296 914 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 SCP2P22307 547 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 DDX6P26196 483 aaKnown RBP eCLIP11.63□□□□□ -0.55
YIPF3-207ENST00000488966 TAF6P49848 677 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 SDHAF4Q5VUM1 108 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 CC2D1AQ6P1N0 951 aaPredicted RBP11.63□□□□□ -0.55
YIPF3-207ENST00000488966 MON1AQ86VX9 555 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 EFCAB13Q8IY85 973 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 EZH1Q92800 747 aaPredicted RBP11.63□□□□□ -0.55
YIPF3-207ENST00000488966 KIF2CQ99661 725 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 P2RY13Q9BPV8 354 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 PI4K2AQ9BTU6 479 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 CCSER1Q9C0I3 900 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 ZHX3Q9H4I2 956 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 ASB7Q9H672 318 aa11.63□□□□□ -0.55
YIPF3-207ENST00000488966 VPS45Q9NRW7 570 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms