RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 ZSCAN20P17040 1043 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 SFPQP23246 707 aaKnown RBP eCLIP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 YWHABP31946 246 aaKnown RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 MCM7P33993 719 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 DEFB103AP81534 67 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 SPIRE1Q08AE8 756 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 LPIN1Q14693 890 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 GPNMBQ14956 572 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 PCBP1Q15365 356 aaKnown RBP eCLIP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 UGCGQ16739 394 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 MTERF2Q49AM1 385 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 ZNF648Q5T619 568 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 Q7L0L9 218 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 TRMT1LQ7Z2T5 733 aaKnown RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 BRAPQ7Z569 592 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 ZNF410Q86VK4 478 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 KIAA0319LQ8IZA0 1049 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 TRAPPC12Q8WVT3 735 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 PSPC1Q8WXF1 523 aaKnown RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 HAS1Q92839 578 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 TOP1MTQ969P6 601 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 MRRFQ96E11 262 aaKnown RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 LIN37Q96GY3 246 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 INTS4Q96HW7 963 aaKnown RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 CEP170P1Q96L14 293 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 SLC6A18Q96N87 628 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 MTMR9Q96QG7 549 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 UIMC1Q96RL1 719 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 EIF2AK1Q9BQI3 630 aaKnown RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 HDAC8Q9BY41 377 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 GCOM2Q9BZD3 368 aaPredicted RBP5.68□□□□□ -1.5
SF3A3-207ENST00000488934 SLC6A17Q9H1V8 727 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 NKX2-4Q9H2Z4 354 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 TUFT1Q9NNX1 390 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 CYP26B1Q9NR63 512 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 DACT1Q9NYF0 836 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 PRR13Q9NZ81 148 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 ZMYM5Q9UJ78 669 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 FBXL21Q9UKT6 434 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 GINS2Q9Y248 185 aa5.68□□□□□ -1.5
SF3A3-207ENST00000488934 SZT2Q5T011 3432 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 COL4A4P53420 1690 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 IGKV6-21A0A0C4DH24 114 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 GRXCR1A8MXD5 290 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 MAFO75444 373 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 VTNP04004 478 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 HSP90AA1P07900 732 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 ATP2B1P20020 1258 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 RPL10P27635 214 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 CD52P31358 61 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 PRPHP41219 470 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 GPC3P51654 580 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 CLCN3P51790 818 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 RABGGTBP53611 331 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 NLRP11P59045 1033 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 HTRA4P83105 476 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TEKQ02763 1124 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 CYP4A11Q02928 519 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 NCBP1Q09161 790 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TMEM62Q0P6H9 643 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 CUL4AQ13619 759 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TFDP1Q14186 410 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 PDIA5Q14554 519 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 MXD4Q14582 209 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TARBP2Q15633 366 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 KIZQ2M2Z5 673 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 BBS9Q3SYG4 887 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 XKR9Q5GH70 373 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 EARS2Q5JPH6 523 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 LARP1BQ659C4 914 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 ARL6IP4Q66PJ3 421 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 ANO5Q75V66 913 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 HSCBQ8IWL3 235 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TPH2Q8IWU9 490 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 LINC01465Q8N7H1 131 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 FBXO15Q8NCQ5 510 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 GJA10Q969M2 543 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TCTN2Q96GX1 697 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 GUCD1Q96NT3 240 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TGS1Q96RS0 853 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 CDX2Q99626 313 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 POLR3CQ9BUI4 534 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TTYH1Q9H313 450 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 DHX33Q9H6R0 707 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 ATP6V0A4Q9HBG4 840 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 CHST12Q9NRB3 414 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 ANKEF1Q9NU02 776 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 SUCOQ9UBS9 1254 aaKnown RBP5.67□□□□□ -1.5
SF3A3-207ENST00000488934 TCFL5Q9UL49 500 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 PADI3Q9ULW8 664 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 MYH15Q9Y2K3 1946 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 ADGRA3Q8IWK6 1321 aa5.67□□□□□ -1.5
SF3A3-207ENST00000488934 FNDC1Q4ZHG4 1894 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 MYH11P35749 1972 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-207ENST00000488934 ENPP3O14638 875 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 SLC26A4O43511 780 aa5.66□□□□□ -1.5
SF3A3-207ENST00000488934 GPR32O75388 356 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms