RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 SLC46A2Q9BY10 475 aa20.6■□□□□ 0.89
GGPS1-206ENST00000488594 CYB561D2O14569 222 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 GDF9O60383 454 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 DDX6P26196 483 aaKnown RBP eCLIP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 AVPR1AP37288 418 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 UBA7P41226 1012 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 AMPD2Q01433 879 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 POU5F1Q01860 360 aaKnown RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 ST3GAL2Q16842 350 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 AASDHQ4L235 1098 aaPredicted RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 SLFN12LQ6IEE8 588 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 CACNA2D4Q7Z3S7 1137 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 C12orf50Q8NA57 414 aaPredicted RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 FAM83CQ9BQN1 747 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 CCSER1Q9C0I3 900 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 GKN1Q9NS71 199 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 NUP210Q8TEM1 1887 aaPredicted RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 MYH11P35749 1972 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 KMT2BQ9UMN6 2715 aaPredicted RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 SOBPA7XYQ1 873 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 EXTL3O43909 919 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 RPP40O75818 363 aaKnown RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 AKAP3O75969 853 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 TAF6P49848 677 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 GTF2BQ00403 316 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 TMEM196Q5HYL7 178 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 SLC39A4Q6P5W5 647 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 KIF2CQ99661 725 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 PYM1Q9BRP8 204 aaKnown RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 SMG9Q9H0W8 520 aaKnown RBP20.59■□□□□ 0.89
GGPS1-206ENST00000488594 KIF9Q9HAQ2 790 aa20.59■□□□□ 0.89
GGPS1-206ENST00000488594 TRDMT1O14717 391 aaKnown RBP20.58■□□□□ 0.88
GGPS1-206ENST00000488594 TBCAO75347 108 aaKnown RBP20.58■□□□□ 0.88
GGPS1-206ENST00000488594 KRT18P05783 430 aaKnown RBP20.58■□□□□ 0.88
GGPS1-206ENST00000488594 ZNF806P0C7X5 589 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 HAPLN1P10915 354 aaPredicted RBP20.58■□□□□ 0.88
GGPS1-206ENST00000488594 ACOT2P49753 483 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 BFSP1Q12934 665 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 RUNX3Q13761 415 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 DCP1BQ8IZD4 617 aaKnown RBP20.58■□□□□ 0.88
GGPS1-206ENST00000488594 GIPC2Q8TF65 315 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 EXOC4Q96A65 974 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 ZHX3Q9H4I2 956 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 ABI2Q9NYB9 513 aaPredicted RBP20.58■□□□□ 0.88
GGPS1-206ENST00000488594 SLC8A2Q9UPR5 921 aa20.58■□□□□ 0.88
GGPS1-206ENST00000488594 AXIN1O15169 862 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 EPN2O95208 641 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 RAP1GAPP47736 663 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 DHX8Q14562 1220 aaKnown RBP20.57■□□□□ 0.88
GGPS1-206ENST00000488594 ADALQ6DHV7 355 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 LRRTM3Q86VH5 581 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 CAMKK1Q8N5S9 505 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 CHAMP1Q96JM3 812 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 ARRDC1-AS1Q9H2J1 176 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 DPP3Q9NY33 737 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 PCDHGA5Q9Y5G8 931 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
GGPS1-206ENST00000488594 H3BQV1 296 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 CCDC192P0DO97 292 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 NLRP12P59046 1061 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 SV2CQ496J9 727 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 ERICH6BQ5W0A0 696 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 WSCD1Q658N2 575 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 FSTL4Q6MZW2 842 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 CC2D1AQ6P1N0 951 aaPredicted RBP20.56■□□□□ 0.88
GGPS1-206ENST00000488594 TMEM150AQ86TG1 271 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 NT5DC4Q86YG4 428 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 MAB21L3Q8N8X9 362 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 RASSF8Q8NHQ8 419 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 USP13Q92995 863 aaPredicted RBP20.56■□□□□ 0.88
GGPS1-206ENST00000488594 FIZ1Q96SL8 496 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 ST6GALNAC4Q9H4F1 302 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 HPS4Q9NQG7 708 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 BLOC1S4Q9NUP1 217 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 TDP1Q9NUW8 608 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 AGO2Q9UKV8 859 aaKnown RBP20.56■□□□□ 0.88
GGPS1-206ENST00000488594 PCDHB5Q9Y5E4 795 aa20.56■□□□□ 0.88
GGPS1-206ENST00000488594 KPNA7A9QM74 516 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 BMP15O95972 392 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 F11P03951 625 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 HMGA1P17096 107 aaKnown RBP20.55■□□□□ 0.88
GGPS1-206ENST00000488594 PNPLA4P41247 253 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 PDGFRLQ15198 375 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 NFE2Q16621 373 aaPredicted RBP20.55■□□□□ 0.88
GGPS1-206ENST00000488594 FBXO43Q4G163 708 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 PKN3Q6P5Z2 889 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 MRPS31Q92665 395 aaKnown RBP20.55■□□□□ 0.88
GGPS1-206ENST00000488594 RAD54LQ92698 747 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 ZNF560Q96MR9 790 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 EBF3Q9H4W6 596 aa20.55■□□□□ 0.88
GGPS1-206ENST00000488594 TSC2P49815 1807 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 ANKRD63C9JTQ0 380 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 CSH1P0DML2 217 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 CSH2P0DML3 217 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 DRD1P21728 446 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 KCNA4P22459 653 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 NMT1P30419 496 aaKnown RBP20.54■□□□□ 0.88
GGPS1-206ENST00000488594 HOXC13P31276 330 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 LONP1P36776 959 aaKnown RBP20.54■□□□□ 0.88
GGPS1-206ENST00000488594 PXNP49023 591 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms